Conservation of cofitness between AO353_11185 and AO353_17635 in Pseudomonas fluorescens FW300-N2E3

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_11185 channel protein TolC 1.0 AO353_17635 RNA polymerase subunit sigma 0.52 6
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_1798 Type I secretion system, outer membrane component LapE 0.89 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor low > 87
Pseudomonas sp. RS175 0.87 PFR28_04786 Outer membrane efflux protein BepC 0.82 PFR28_00692 Sigma factor AlgU regulatory protein MucB low > 88
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_535 Type I secretion system, outer membrane component LapE 0.88 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE 0.86 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_10565 channel protein TolC 0.85 AO356_04565 RNA polymerase subunit sigma 0.43 20
Pectobacterium carotovorum WPP14 0.60 HER17_RS05865 TolC family outer membrane protein 0.12 HER17_RS05790 sigma-E factor regulatory protein RseB low > 75
Pseudomonas sp. S08-1 0.55 OH686_20630 Type I secretion outer membrane protein, TolC family or Type I secretion system, outer membrane component LapE 0.53 OH686_20055 Sigma factor RpoE negative regulatory protein RseB precursor
Pseudomonas putida KT2440 0.51 PP_4519 Agglutination protein 0.66 PP_1429 Sigma factor AlgU regulatory protein MucB 0.25 36
Shewanella loihica PV-4 0.34 Shew_0310 TolC family type I secretion outer membrane protein (RefSeq) 0.13 Shew_1050 sigma E regulatory protein, MucB/RseB (RefSeq) low > 60
Shewanella amazonensis SB2B 0.32 Sama_3261 type I secretion outer membrane protein, TolC (RefSeq) 0.16 Sama_0876 putative sigma E regulatory protein, MucB/RseB (RefSeq) low > 62
Shewanella sp. ANA-3 0.32 Shewana3_0379 TolC family type I secretion outer membrane protein (RefSeq) 0.14 Shewana3_3030 sigma E regulatory protein, MucB/RseB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.32 SO4320 aggA agglutination protein (NCBI ptt file) 0.14 SO1344 rseB sigma-E factor regulatory protein RseB (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_08150 agglutination protein 0.16 CSW01_12475 sigma-E factor regulatory protein RseB
Pantoea sp. MT58 0.10 IAI47_06500 TolC family outer membrane protein 0.15 IAI47_04860 sigma-E factor regulatory protein RseB low > 76
Enterobacter asburiae PDN3 0.08 EX28DRAFT_1346 type I secretion outer membrane protein, TolC family 0.15 EX28DRAFT_0074 sigma E regulatory protein, MucB/RseB low > 76
Enterobacter sp. TBS_079 0.08 MPMX20_03523 hypothetical protein 0.15 MPMX20_03442 Sigma-E factor regulatory protein RseB low > 85

Not shown: 8 genomes with orthologs for AO353_11185 only; 44 genomes with orthologs for AO353_17635 only