Conservation of cofitness between AO353_26720 and AO353_14995 in Pseudomonas fluorescens FW300-N2E3

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_26720 LysR family transcriptional regulator 1.0 AO353_14995 16S rRNA methyltransferase 0.31 9
Pseudomonas simiae WCS417 0.72 PS417_07220 LysR family transcriptional regulator 0.90 PS417_04525 16S rRNA methyltransferase low > 88
Pseudomonas fluorescens SBW25 0.72 PFLU_RS07335 LysR family transcriptional regulator 0.90 PFLU_RS04570 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS07335 LysR family transcriptional regulator 0.90 PFLU_RS04570 class I SAM-dependent methyltransferase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3165 transcriptional regulator, LysR family 0.83 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3165 transcriptional regulator, LysR family 0.83 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase low > 86
Pantoea sp. MT58 0.59 IAI47_10140 LysR family transcriptional regulator 0.29 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 76
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0581 Transcriptional regulator 0.29 EX28DRAFT_3579 16S RNA G1207 methylase RsmC low > 76
Enterobacter sp. TBS_079 0.57 MPMX20_02971 HTH-type transcriptional regulator CynR 0.29 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C low > 85
Pseudomonas putida KT2440 0.51 PP_2054 putative DNA-binding transcriptional regulator 0.76 PP_0761 Ribosomal RNA small subunit methyltransferase C low > 96
Pseudomonas sp. RS175 0.51 PFR28_01942 HTH-type transcriptional regulator CynR 0.94 PFR28_03623 Ribosomal RNA small subunit methyltransferase C low > 88
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4462 LysR family transcriptional regulator YbhD 0.97 Pf1N1B4_2953 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 87
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_28895 LysR family transcriptional regulator 0.96 AO356_06940 16S rRNA methyltransferase low > 104
Dickeya dadantii 3937 0.47 DDA3937_RS07805 LysR family transcriptional regulator 0.29 DDA3937_RS03190 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 74
Klebsiella michiganensis M5al 0.41 BWI76_RS04365 LysR family transcriptional regulator 0.28 BWI76_RS04080 16S rRNA (guanine(1207)-N(2))-methyltransferase low > 92
Escherichia coli ECOR27 0.40 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Escherichia fergusonii Becca 0.40 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.29 EFB2_04076 Ribosomal RNA small subunit methyltransferase C low > 86
Escherichia coli ECRC62 0.40 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.28 BNILDI_07980 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Escherichia coli ECRC99 0.40 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS04090 LysR family transcriptional regulator 0.29 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Escherichia coli ECRC98 0.40 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 86
Escherichia coli BW25113 0.40 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.29 b4371 rsmC 16S ribosomal RNA m2G1207 methyltransferase (NCBI) low > 76
Escherichia coli ECRC101 0.40 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Escherichia coli ECRC100 0.40 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 80
Escherichia coli ECRC102 0.40 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Escherichia coli ECOR38 0.40 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.29 HEPCGN_09305 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.29 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C low > 73
Rahnella sp. WP5 0.27 EX31_RS20145 LysR family transcriptional regulator 0.27 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 89
Serratia liquefaciens MT49 0.27 IAI46_18415 LysR family transcriptional regulator 0.29 IAI46_02860 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF2038 LysR family transcriptional regulator YfeR 0.30 GFF1031 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 78
Dickeya dianthicola 67-19 0.25 HGI48_RS00115 LysR family transcriptional regulator 0.28 HGI48_RS03340 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 71
Dickeya dianthicola ME23 0.25 DZA65_RS00130 LysR family transcriptional regulator 0.28 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Escherichia coli BL21 0.22 ECD_02308 transcriptional regulator of yefH 0.29 ECD_04246 16S rRNA m(2)G1207 methyltransferase, SAM-dependent low > 61
Marinobacter adhaerens HP15 0.18 HP15_4145 transcriptional regulator, LysR family 0.32 HP15_2266 rRNA (guanine-N(2)-)-methyltransferase low > 73

Not shown: 20 genomes with orthologs for AO353_26720 only; 13 genomes with orthologs for AO353_14995 only