Conservation of cofitness between ABZR87_RS18215 and ABZR87_RS16180 in Ralstonia sp. UNC404CL21Col

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS18215 DNA-binding transcriptional regulator 1.0 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase 0.37 8
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS32830 AraC family transcriptional regulator 0.79 BPHYT_RS04980 lysine decarboxylase — —
Paraburkholderia graminis OAS925 0.79 ABIE53_004928 LacI family transcriptional regulator 0.79 ABIE53_001270 arginine decarboxylase — —
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_03875 transcriptional regulator, AraC family 0.79 H281DRAFT_00160 ornithine decarboxylase — —
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS25880 DNA-binding transcriptional regulator 0.79 QEN71_RS25000 arginine/lysine/ornithine decarboxylase — —
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS22455 AraC family transcriptional regulator 0.78 HSERO_RS17280 lysine decarboxylase — —
Pseudomonas simiae WCS417 0.64 PS417_10950 AraC family transcriptional regulator 0.47 PS417_12240 lysine decarboxylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS11310 DNA-binding transcriptional regulator 0.47 PFLU_RS12930 lysine decarboxylase low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS11310 DNA-binding transcriptional regulator 0.47 PFLU_RS12930 lysine decarboxylase low > 109
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3834 Transcriptional regulators 0.31 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Pectobacterium carotovorum WPP14 0.45 HER17_RS21065 XylR family transcriptional regulator 0.22 HER17_RS16680 ornithine decarboxylase low > 75
Enterobacter sp. TBS_079 0.45 MPMX20_00161 Xylose operon regulatory protein 0.31 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Rahnella sp. WP5 0.45 EX31_RS09745 XylR family transcriptional regulator 0.31 EX31_RS12950 lysine decarboxylase LdcC 0.32 81
Pantoea sp. MT58 0.44 IAI47_00175 XylR family transcriptional regulator 0.31 IAI47_15445 lysine decarboxylase LdcC low > 76
Serratia liquefaciens MT49 0.44 IAI46_00300 DNA-binding transcriptional regulator 0.32 IAI46_20145 lysine decarboxylase CadA low > 86
Klebsiella michiganensis M5al 0.43 BWI76_RS27045 XylR family transcriptional regulator 0.32 BWI76_RS07195 lysine decarboxylase CadA low > 92
Escherichia coli BW25113 0.43 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 0.34 b4117 adiA biodegradative arginine decarboxylase (RefSeq) low > 76
Escherichia coli ECRC98 0.43 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR 0.34 JDDGAC_16185 adiA arginine decarboxylase low > 86
Escherichia coli ECRC62 0.43 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR 0.34 BNILDI_06675 adiA arginine decarboxylase low > 75
Escherichia coli BL21 0.43 ECD_03421 xylose divergent operon transcriptional activator 0.34 ECD_03988 arginine decarboxylase low > 61
Escherichia coli ECOR27 0.43 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR 0.34 NOLOHH_04815 adiA arginine decarboxylase 0.42 60
Escherichia coli ECRC102 0.43 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR 0.34 NIAGMN_10395 adiA arginine decarboxylase — —
Escherichia coli ECRC99 0.43 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR 0.34 KEDOAH_15615 adiA arginine decarboxylase — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR 0.34 ECOLIN_RS23825 arginine decarboxylase low > 55
Escherichia coli ECOR38 0.43 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR 0.34 HEPCGN_11185 adiA arginine decarboxylase low > 87
Escherichia coli ECRC101 0.43 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR 0.34 MCAODC_03060 adiA arginine decarboxylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00135 Xylose operon regulatory protein 0.34 OHPLBJKB_03927 Biodegradative arginine decarboxylase low > 73
Escherichia coli ECRC100 0.43 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR 0.34 OKFHMN_12550 adiA arginine decarboxylase low > 80
Escherichia fergusonii Becca 0.43 EFB2_00238 Xylose operon regulatory protein 0.34 EFB2_04465 Biodegradative arginine decarboxylase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF442 Xylose activator XylR (AraC family) 0.34 GFF1473 Arginine decarboxylase, catabolic (EC 4.1.1.19) low > 78

Not shown: 11 genomes with orthologs for ABZR87_RS18215 only; 28 genomes with orthologs for ABZR87_RS16180 only