Conservation of cofitness between Shewana3_0099 and Shewana3_3704 in Shewanella sp. ANA-3

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_0099 histidine utilization repressor (RefSeq) 1.0 Shewana3_3704 deoxyribodipyrimidine photolyase-related protein (RefSeq) 0.50 10
Shewanella oneidensis MR-1 0.98 SO0096 hutC histidine utilization repressor (NCBI ptt file) 0.94 SO4169 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.74 Sama_0081 histidine utilization repressor (RefSeq) 0.63 Sama_2497 hypothetical protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00903 putative HTH-type transcriptional regulator YurK 0.36 MIT1002_02046 Deoxyribodipyrimidine photo-lyase-related protein low > 70
Pseudomonas putida KT2440 0.48 PP_5035 Histidine utilization repressor 0.33 PP_2732 conserved protein of unknown function low > 96
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0366 transcriptional regulator, GntR family 0.34 Psyr_1785 Deoxyribodipyrimidine photolyase-related protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0366 transcriptional regulator, GntR family 0.34 Psyr_1785 Deoxyribodipyrimidine photolyase-related protein low > 86
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_06100 histidine utilization repressor 0.61 CSW01_18210 cryptochrome/photolyase family protein low > 62
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.42 EX28DRAFT_0580 Uncharacterized protein related to deoxyribodipyrimidine photolyase low > 76
Pseudomonas sp. S08-1 0.44 OH686_16760 histidine utilization repressor 0.36 OH686_23385 deoxyribodipyrimidine photolyase-related protein low > 80
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01035 histidine utilization repressor 0.44 ABZR87_RS21020 cryptochrome/photolyase family protein low > 80
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2559 Histidine utilization repressor 0.41 Ac3H11_79 photolyase protein family low > 79
Bosea sp. OAE506 0.26 ABIE41_RS23630 histidine utilization repressor 0.36 ABIE41_RS16750 cryptochrome/photolyase family protein low > 77
Caulobacter crescentus NA1000 0.24 CCNA_01013 histidine utilization repressor 0.33 CCNA_00683 Deoxyribodipyrimidine photo-lyase-related protein low > 66
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01013 histidine utilization repressor 0.33 CCNA_00683 Deoxyribodipyrimidine photo-lyase-related protein low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS06610 histidine utilization repressor 0.37 A4249_RS12810 cryptochrome/photolyase family protein low > 48
Phaeobacter inhibens DSM 17395 0.23 PGA1_c36370 HTH-type transcriptional regulator, GntR family 0.37 PGA1_c00350 Uncharacterized protein related to deoxyribodipyrimidine photolyase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.3293.1 Histidine utilization repressor 0.37 Xcc-8004.3664.1 photolyase protein family low > 74
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS14920 GntR family transcriptional regulator 0.41 HSERO_RS18595 deoxyribodipyrimidine photo-lyase — —

Not shown: 56 genomes with orthologs for Shewana3_0099 only; 7 genomes with orthologs for Shewana3_3704 only