Conservation of cofitness between Shewana3_1494 and Shewana3_0434 in Shewanella sp. ANA-3

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1494 hypothetical protein (RefSeq) 1.0 Shewana3_0434 anti-RNA polymerase sigma 70 factor (RefSeq) 0.77 3
Shewanella oneidensis MR-1 0.85 SO3051 hypothetical xanthine dehydrogenase accessory factor (NCBI ptt file) 0.91 SO0433 rsd regulator of sigma D (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.47 Shew_2268 hypothetical protein (RefSeq) 0.71 Shew_3423 anti-RNA polymerase sigma 70 factor (RefSeq) low > 60
Shewanella amazonensis SB2B 0.43 Sama_3436 hypothetical protein (RefSeq) 0.68 Sama_0386 anti-RNA polymerase sigma 70 factor (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.29 MIT1002_02320 putative xanthine dehydrogenase subunit A 0.36 MIT1002_03798 Regulator of sigma D low > 70
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_30450 xanthine dehydrogenase 0.29 AO356_12810 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1951 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 0.29 Pf6N2E2_4435 Regulator of sigma D low > 103
Pseudomonas sp. S08-1 0.18 OH686_18555 Xanthine and CO maturation factor, XdhC/CoxF family 0.32 OH686_13925 Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD low > 80
Pseudomonas putida KT2440 0.18 PP_2480 putative Xanthine dehydrogenase accessory factor 0.30 PP_0191 Transcriptional regulatory protein AlgQ low > 96
Marinobacter adhaerens HP15 0.11 HP15_1259 xanthine dehydrogenase accessory factor 0.38 HP15_221 anti-RNA polymerase sigma 70 factor 0.68 55
Pseudomonas stutzeri RCH2 0.11 Psest_3448 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 0.30 Psest_3743 Regulator of sigma D low > 67
Pseudomonas fluorescens GW456-L13 0.10 PfGW456L13_3924 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 0.27 PfGW456L13_861 Regulator of sigma D low > 87
Pseudomonas fluorescens FW300-N2E3 0.09 AO353_27060 XshC-Cox1 family protein 0.28 AO353_08965 transcriptional regulator low > 101
Serratia liquefaciens MT49 0.08 IAI46_21360 XdhC family protein 0.35 IAI46_01325 Rsd/AlgQ family anti-sigma factor low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.08 Psyr_2391 Protein of unknown function DUF182 0.31 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ low > 86
Pseudomonas syringae pv. syringae B728a 0.08 Psyr_2391 Protein of unknown function DUF182 0.31 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ low > 86
Pantoea sp. MT58 0.07 IAI47_19405 XdhC family protein 0.29 IAI47_18080 Rsd/AlgQ family anti-sigma factor low > 76

Not shown: 25 genomes with orthologs for Shewana3_1494 only; 29 genomes with orthologs for Shewana3_0434 only