Conservation of cofitness between Sama_1564 and Sama_0327 in Shewanella amazonensis SB2B

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1564 peptidyl-dipeptidase Dcp (RefSeq) 1.0 Sama_0327 radC DNA repair protein RadC (RefSeq) 0.42 11
Shewanella loihica PV-4 0.74 Shew_2161 peptidyl-dipeptidase Dcp (RefSeq) 0.82 Shew_3481 DNA repair protein RadC (RefSeq) low > 60
Shewanella sp. ANA-3 0.72 Shewana3_2492 peptidyl-dipeptidase Dcp (RefSeq) 0.84 Shewana3_3770 radC DNA repair protein RadC (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_1374 Zn-dependent oligopeptidases 0.47 B158DRAFT_0781 DNA repair protein radc low > 40
Phocaeicola dorei CL03T12C01 0.48 ABI39_RS06640 M3 family metallopeptidase 0.31 ABI39_RS02750 DNA repair protein RadC low > 72
Phocaeicola vulgatus CL09T03C04 0.47 HMPREF1058_RS10480 M3 family metallopeptidase 0.31 HMPREF1058_RS08525 DNA repair protein RadC low > 67
Bacteroides thetaiotaomicron VPI-5482 0.47 BT2834 peptidyl-dipeptidase (NCBI ptt file) 0.31 BT3695 putative DNA repair protein (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.47 BACOVA_02082 peptidase family M3 0.30 BACOVA_03503 DNA repair protein RadC low > 94
Parabacteroides merdae CL09T00C40 0.46 HMPREF1078_RS08580 M3 family metallopeptidase 0.28 HMPREF1078_RS04930 DNA repair protein RadC low > 61
Bacteroides stercoris CC31F 0.45 HMPREF1181_RS01125 M3 family metallopeptidase 0.28 HMPREF1181_RS03225 DNA repair protein RadC low > 56
Azospirillum brasilense Sp245 0.42 AZOBR_RS23485 peptidase M3 0.22 AZOBR_RS04400 DNA repair protein RadC low > 97
Rhodopseudomonas palustris CGA009 0.41 TX73_004495 M3 family metallopeptidase 0.22 TX73_002000 DNA repair protein RadC low > 86
Bosea sp. OAE506 0.39 ABIE41_RS12985 M3 family metallopeptidase 0.24 ABIE41_RS13815 DNA repair protein RadC low > 77
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_2479 Zn-dependent oligopeptidases 0.23 Ga0059261_3175 DNA repair protein radc low > 68
Phaeobacter inhibens DSM 17395 0.37 PGA1_c26590 peptidyl-dipeptidase Dcp 0.29 PGA1_c34550 DNA repair protein RadC low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_00401 Peptidyl-dipeptidase dcp 0.54 MIT1002_00049 DNA repair protein RadC low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS12525 M3 family metallopeptidase 0.26 A4249_RS00510 DNA repair protein RadC low > 48
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_01885 peptidase M3 0.27 CA264_13835 hypothetical protein low > 74
Dinoroseobacter shibae DFL-12 0.33 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) 0.26 Dshi_3569 DNA repair protein RadC (RefSeq) low > 64

Not shown: 6 genomes with orthologs for Sama_1564 only; 73 genomes with orthologs for Sama_0327 only