Conservation of cofitness between Shew_3618 and Shew_3611 in Shewanella loihica PV-4

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_3618 general secretory pathway protein E (RefSeq) 1.0 Shew_3611 general secretion pathway protein L (RefSeq) 0.59 9
Shewanella sp. ANA-3 0.87 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) 0.72 Shewana3_0159 general secretion pathway protein L (RefSeq) 0.98 1
Shewanella oneidensis MR-1 0.86 SO0167 gspE general secretion pathway protein E (NCBI ptt file) 0.72 SO0174 gspL general secretion pathway protein L (NCBI ptt file) 0.96 4
Shewanella amazonensis SB2B 0.85 Sama_0170 general secretion pathway protein E (RefSeq) 0.65 Sama_0177 general secretion pathway protein L (RefSeq)
Alteromonas macleodii MIT1002 0.67 MIT1002_03977 Type II traffic warden ATPase 0.35 MIT1002_03984 General secretion pathway protein L 0.99 5
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13785 type II secretion system protein GspE 0.22 CSW01_13750 type II secretion system protein GspL
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0690 general secretory pathway protein E 0.11 B158DRAFT_0697 Type II secretory pathway, component PulL 0.88 4
Dickeya dianthicola ME23 0.61 DZA65_RS15675 type II secretion system ATPase GspE 0.25 DZA65_RS15640 type II secretion system protein GspL low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS14730 type II secretion system ATPase GspE 0.24 HGI48_RS14695 type II secretion system protein GspL low > 71
Dickeya dadantii 3937 0.61 DDA3937_RS14795 type II secretion system ATPase GspE 0.24 DDA3937_RS14760 type II secretion system protein GspL 0.68 21
Escherichia coli ECOR38 0.61 HEPCGN_18055 gspE general secretion pathway protein E 0.12 HEPCGN_18090 gspL general secretion pathway protein L 0.94 5
Escherichia coli BL21 0.60 ECD_02837 putative type II secretion protein GspE 0.09 ECD_03184 general secretory pathway component, cryptic low > 61
Escherichia coli ECOR27 0.60 NOLOHH_10980 gspE general secretion pathway protein E 0.13 NOLOHH_11015 gspL general secretion pathway protein L low > 75
Escherichia fergusonii Becca 0.60 EFB2_00846 Type II secretion system protein E 0.12 EFB2_00853 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_00740 Type II secretion system protein E 0.13 OHPLBJKB_00747 Type II secretion system protein L low > 73
Klebsiella michiganensis M5al 0.57 BWI76_RS05085 general secretion pathway protein GspE 0.18 BWI76_RS05050 general secretion pathway protein GspL low > 92
Pseudomonas sp. S08-1 0.57 OH686_11785 type II secretion system protein E 0.10 OH686_11750 type II secretion system protein L low > 80
Escherichia coli ECRC101 0.57 MCAODC_15270 gspE type II secretion system ATPase GspE 0.16 MCAODC_15305 gspL type II secretion system protein GspL low > 87
Escherichia coli ECRC102 0.57 NIAGMN_28600 gspE type II secretion system ATPase GspE 0.16 NIAGMN_28565 gspL type II secretion system protein GspL
Escherichia coli ECRC98 0.57 JDDGAC_30300 gspE type II secretion system ATPase GspE 0.16 JDDGAC_30335 gspL type II secretion system protein GspL low > 86
Escherichia coli ECRC100 0.57 OKFHMN_00280 gspE type II secretion system ATPase GspE 0.16 OKFHMN_00245 gspL type II secretion system protein GspL low > 80
Pectobacterium carotovorum WPP14 0.56 HER17_RS06690 type II secretion system ATPase GspE 0.22 HER17_RS06725 type II secretion system protein GspL low > 75
Rahnella sp. WP5 0.56 EX31_RS16170 type II secretion system ATPase GspE 0.16 EX31_RS16205 type II secretion system protein GspL low > 89
Enterobacter sp. TBS_079 0.55 MPMX20_01516 Putative type II secretion system protein E 0.10 MPMX20_01523 Putative type II secretion system protein L low > 85
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2078 type II secretion system protein E 0.08 EX28DRAFT_2071 Type II secretory pathway, component PulL low > 76
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3745 General secretion pathway protein E 0.07 Pf6N2E2_3738 General secretion pathway protein L low > 103
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_09340 type II secretion system protein GspE 0.08 AO356_09305 type II secretory protein pull low > 104
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_265 General secretion pathway protein E 0.07 PfGW456L13_258 General secretion pathway protein L low > 87
Escherichia coli BW25113 0.52 b3326 gspE general secretory pathway component, cryptic (NCBI) 0.09 b3333 yheK putative general protein secretion protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.52 ECOLIN_RS19065 type II secretion system ATPase GspE 0.12 ECOLIN_RS17045 type II secretion system protein GspL low > 55
Erwinia tracheiphila SCR3 0.49 LU632_RS25235 gspE type II secretion system ATPase GspE 0.07 LU632_RS25265 gspL type II secretion system protein GspL low > 74

Not shown: 30 genomes with orthologs for Shew_3618 only; 0 genomes with orthologs for Shew_3611 only