Conservation of cofitness between SO2389 and SO1870 in Shewanella oneidensis MR-1

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2389 emrD multidrug resistance protein D (NCBI ptt file) 1.0 SO1870 speA biosynthetic arginine decarboxylase (NCBI ptt file) 0.41 10
Shewanella sp. ANA-3 0.92 Shewana3_1989 emrD multidrug resistance protein D (RefSeq) 0.99 Shewana3_1624 arginine decarboxylase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_15055 Bcr/CflA family drug resistance efflux transporter 0.69 CSW01_18235 arginine decarboxylase low > 62
Serratia liquefaciens MT49 0.33 IAI46_24610 multidrug efflux MFS transporter EmrD 0.57 IAI46_21140 biosynthetic arginine decarboxylase low > 87
Erwinia amylovora T8 0.32 OLJFJH_06025 multidrug efflux MFS transporter EmrD 0.56 OLJFJH_08600 biosynthetic arginine decarboxylase low > 58
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS18525 multidrug efflux MFS transporter EmrD 0.56 PagCFBP13505_RS16040 biosynthetic arginine decarboxylase low > 74
Pantoea sp. MT58 0.31 IAI47_00815 multidrug efflux MFS transporter EmrD 0.56 IAI47_03660 biosynthetic arginine decarboxylase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF296 Multidrug resistance protein D 0.56 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 78
Enterobacter asburiae PDN3 0.30 EX28DRAFT_3962 Multidrug resistance protein 0.56 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) low > 76
Rahnella sp. WP5 0.30 EX31_RS14280 multidrug efflux MFS transporter EmrD 0.55 EX31_RS21355 biosynthetic arginine decarboxylase low > 89
Klebsiella pneumoniae MKP103 0.30 KDGMDA_08545 multidrug efflux MFS transporter EmrD 0.56 KDGMDA_04560 biosynthetic arginine decarboxylase low > 95
Escherichia coli ECRC99 0.30 KEDOAH_13015 emrD multidrug efflux MFS transporter EmrD 0.56 KEDOAH_08835 speA biosynthetic arginine decarboxylase — —
Escherichia coli ECRC100 0.30 OKFHMN_15135 emrD multidrug efflux MFS transporter EmrD 0.56 OKFHMN_19305 speA biosynthetic arginine decarboxylase low > 79
Escherichia coli ECOR38 0.30 HEPCGN_13865 emrD multidrug efflux MFS transporter EmrD 0.56 HEPCGN_18610 speA biosynthetic arginine decarboxylase low > 88
Escherichia coli ECRC102 0.30 NIAGMN_12890 emrD multidrug efflux MFS transporter EmrD 0.56 NIAGMN_17070 speA biosynthetic arginine decarboxylase low > 80
Escherichia coli ECRC101 0.30 MCAODC_05645 emrD multidrug efflux MFS transporter EmrD 0.56 MCAODC_09825 speA biosynthetic arginine decarboxylase low > 87
Escherichia coli ECRC98 0.30 JDDGAC_18755 emrD multidrug efflux MFS transporter EmrD 0.56 JDDGAC_22935 speA biosynthetic arginine decarboxylase low > 87
Escherichia fergusonii Becca 0.30 EFB2_00025 Multidrug resistance protein D 0.56 EFB2_00962 Biosynthetic arginine decarboxylase low > 86
Escherichia coli ECOR27 0.30 NOLOHH_07300 emrD multidrug efflux MFS transporter EmrD 0.56 NOLOHH_11175 speA biosynthetic arginine decarboxylase 0.83 12
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00027 Multidrug resistance protein D 0.56 OHPLBJKB_00778 Biosynthetic arginine decarboxylase low > 74
Escherichia coli BL21 0.30 ECD_03557 multidrug efflux system protein 0.56 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding low > 61
Escherichia coli ECRC62 0.30 BNILDI_04225 emrD multidrug efflux MFS transporter EmrD 0.56 BNILDI_09755 speA biosynthetic arginine decarboxylase low > 75
Escherichia coli Nissle 1917 0.30 ECOLIN_RS21190 multidrug efflux MFS transporter EmrD 0.56 ECOLIN_RS16350 biosynthetic arginine decarboxylase low > 55
Escherichia coli BW25113 0.30 b3673 emrD 2-module integral membrane pump; multidrug resistance (VIMSS) 0.56 b2938 speA arginine decarboxylase (NCBI) 0.24 73
Klebsiella michiganensis M5al 0.29 BWI76_RS27845 multidrug transporter EmrD 0.56 BWI76_RS24030 arginine decarboxylase low > 92
Enterobacter sp. TBS_079 0.29 MPMX20_00027 Multidrug resistance protein D 0.56 MPMX20_03799 Biosynthetic arginine decarboxylase low > 85
Pseudomonas orientalis W4I3 0.16 QF045_RS17790 multidrug effflux MFS transporter 0.45 QF045_RS06040 arginine decarboxylase low > 93
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_29035 multidrug transporter CflA 0.45 AO356_08155 arginine decarboxylase low > 104
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_1709 multidrug resistance transporter, Bcr/CflA family 0.45 Pf6N2E2_3504 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 103
Pectobacterium carotovorum WPP14 0.15 HER17_RS13830 multidrug effflux MFS transporter 0.56 HER17_RS02665 biosynthetic arginine decarboxylase low > 75
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.3876.1 MFS transporter 0.44 Xcc-8004.4909.1 Biosynthetic arginine decarboxylase (EC 4.1.1.19) — —
Pseudomonas sp. S08-1 0.14 OH686_23895 Multidrug resistance transporter, Bcr/CflA family 0.45 OH686_07545 arginine decarboxylase low > 80
Rhodanobacter sp000427505 FW510-R12 0.12 LRK53_RS14160 multidrug effflux MFS transporter 0.44 LRK53_RS17950 arginine decarboxylase — —

Not shown: 3 genomes with orthologs for SO2389 only; 44 genomes with orthologs for SO1870 only