Conservation of cofitness between SO2744 and SO0952 in Shewanella oneidensis MR-1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2744 DNA damage response helicase (yejH or radD) (from data) 1.0 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) 0.46 5
Shewanella sp. ANA-3 0.94 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) 0.97 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 73
Shewanella loihica PV-4 0.70 Shew_1532 type III restriction enzyme, res subunit (RefSeq) 0.80 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 60
Shewanella amazonensis SB2B 0.63 Sama_2080 DNA damage response helicase (yejH or radD) (from data) 0.75 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.59 4
Klebsiella michiganensis M5al 0.52 BWI76_RS19815 ATP-dependent helicase 0.55 BWI76_RS23805 ssDNA exonuclease RecJ low > 92
Pantoea sp. MT58 0.52 IAI47_06580 DEAD/DEAH box helicase 0.55 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ low > 76
Escherichia coli ECOR27 0.52 NOLOHH_14930 radD Putative DNA repair helicase RadD 0.57 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ low > 57
Escherichia coli ECRC62 0.52 BNILDI_13850 radD Putative DNA repair helicase RadD 0.57 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC102 0.52 NIAGMN_21120 radD Putative DNA repair helicase RadD 0.57 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC98 0.52 JDDGAC_27315 radD Putative DNA repair helicase RadD 0.57 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli BW25113 0.52 b2184 yejH DNA damage response helicase (yejH or radD) (from data) 0.57 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) 0.33 20
Escherichia coli ECRC101 0.52 MCAODC_14405 radD Putative DNA repair helicase RadD 0.57 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC101 0.52 OKFHMN_23355 radD Putative DNA repair helicase RadD 0.57 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC99 0.52 KEDOAH_04830 radD Putative DNA repair helicase RadD 0.57 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli BL21 0.52 ECD_02114 putative ATP-dependent DNA or RNA helicase 0.57 ECD_02724 ssDNA exonuclease, 5 0.55 21
Escherichia coli ECOR38 0.52 HEPCGN_22620 radD Putative DNA repair helicase RadD 0.57 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3752 ATP-dependent RNA helicase YejH 0.56 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 78
Escherichia coli Nissle 1917 0.52 ECOLIN_RS12765 DEAD/DEAH box helicase 0.57 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ low > 52
Escherichia fergusonii Becca 0.52 EFB2_01672 Putative DNA repair helicase RadD 0.57 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ low > 86
Pectobacterium carotovorum WPP14 0.52 HER17_RS12960 DEAD/DEAH box helicase family protein 0.55 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01525 Putative DNA repair helicase RadD 0.57 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_03150 Putative DNA repair helicase RadD 0.55 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ low > 85
Serratia liquefaciens MT49 0.52 IAI46_17350 DEAD/DEAH box helicase family protein 0.57 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ low > 86
Rahnella sp. WP5 0.52 EX31_RS19200 DEAD/DEAH box helicase 0.55 EX31_RS13470 single-stranded-DNA-specific exonuclease RecJ low > 89
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0377 DNA or RNA helicases of superfamily II 0.56 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS17600 DEAD/DEAH box helicase 0.54 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ low > 74
Dickeya dadantii 3937 0.51 DDA3937_RS09150 DEAD/DEAH box helicase 0.57 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ low > 74
Marinobacter adhaerens HP15 0.50 HP15_2832 DNA damage response helicase (yejH or radD) (from data) 0.52 HP15_766 bacterial RecJ exonuclease 0.58 8
Dickeya dianthicola ME23 0.49 DZA65_RS09490 DEAD/DEAH box helicase 0.57 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS09190 DEAD/DEAH box helicase 0.57 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ low > 71
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_08225 ATP-dependent helicase 0.58 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ low > 62

Not shown: 0 genomes with orthologs for SO2744 only; 65 genomes with orthologs for SO0952 only