Conservation of cofitness between b3220 and b3771 in Escherichia coli BW25113

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3220 yhcG hypothetical protein (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.35 14
Escherichia coli ECOR27 0.97 NOLOHH_09675 yhcG Putative nuclease YhcG 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC62 0.97 BNILDI_01860 yhcG Putative nuclease YhcG 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase low > 75
Escherichia fergusonii Becca 0.97 EFB2_00609 Putative nuclease YhcG 0.99 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC98 0.97 JDDGAC_21500 yhcG Putative nuclease YhcG 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC99 0.97 KEDOAH_10275 yhcG Putative nuclease YhcG 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 0.88 MCAODC_08395 yhcG Putative nuclease YhcG 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase low > 87
Escherichia coli ECRC102 0.88 NIAGMN_15635 yhcG Putative nuclease YhcG 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC100 0.88 OKFHMN_17875 yhcG Putative nuclease YhcG 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase low > 80
Escherichia coli ECOR38 0.87 HEPCGN_16750 DUF1016 domain-containing protein 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2958 Putative uncharacterized protein YhcG 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Castellaniella sp019104865 MT123 0.61 ABCV34_RS05470 PDDEXK nuclease domain-containing protein 0.72 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS41790 PDDEXK nuclease domain-containing protein 0.74 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Variovorax sp. SCN45 0.53 GFF4895 FIG074102: hypothetical protein 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Phocaeicola dorei CL03T12C01 0.31 ABI39_RS07250 DUF1016 family protein 0.64 ABI39_RS12715 dihydroxy-acid dehydratase low > 72
Phocaeicola vulgatus CL09T03C04 0.31 HMPREF1058_RS12620 DUF1016 family protein 0.64 HMPREF1058_RS16815 dihydroxy-acid dehydratase low > 67
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS05040 PDDEXK nuclease domain-containing protein 0.65 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS00730 DUF1016 family protein 0.64 HMPREF1181_RS08335 dihydroxy-acid dehydratase low > 56
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_3850 FIG074102: hypothetical protein 0.75 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_1634 FIG074102: hypothetical protein 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Bacteroides thetaiotaomicron VPI-5482 0.28 BT4519 conserved hypothetical protein (NCBI ptt file) 0.63 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) low > 81
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_371 FIG074102: hypothetical protein 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Ralstonia solanacearum GMI1000 0.23 RS_RS13135 DUF1016 domain-containing protein 0.28 RS_RS12105 dihydroxy-acid dehydratase — —
Dickeya dianthicola 67-19 0.22 HGI48_RS04120 DUF1016 family protein 0.91 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Pseudomonas fluorescens SBW25 0.21 PFLU_RS26815 DUF1016 domain-containing protein 0.75 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS26815 DUF1016 domain-containing protein 0.75 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Acinetobacter radioresistens SK82 0.21 MPMX26_02868 Putative nuclease YhcG 0.29 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_0608 Protein of unknown function DUF1016 0.74 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_0608 Protein of unknown function DUF1016 0.74 Psyr_0469 dihydroxyacid dehydratase low > 86
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_06417 Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family 0.74 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Azospirillum sp. SherDot2 0.20 MPMX19_05456 Putative nuclease YhcG 0.74 MPMX19_05356 Dihydroxy-acid dehydratase — —
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS18515 hypothetical protein 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.63 40
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00473 hypothetical protein 0.62 BACOVA_03302 dihydroxy-acid dehydratase low > 94

Not shown: 1 genomes with orthologs for b3220 only; 69 genomes with orthologs for b3771 only