Conservation of cofitness between b3281 and b3774 in Escherichia coli BW25113

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) 1.0 b3774 ilvC ketol-acid reductoisomerase (NCBI) 0.95 5
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 1.00 OHPLBJKB_04279 Ketol-acid reductoisomerase (NADP(+)) low > 73
Escherichia coli BL21 1.00 ECD_03132 dehydroshikimate reductase, NAD(P)-binding 1.00 ECD_03652 ketol-acid reductoisomerase, NAD(P)-binding low > 60
Escherichia coli ECRC62 0.99 BNILDI_02165 aroE shikimate dehydrogenase 1.00 BNILDI_04765 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECOR27 0.99 NOLOHH_09355 aroE shikimate dehydrogenase 1.00 NOLOHH_06760 ilvC ketol-acid reductoisomerase low > 57
Escherichia coli ECRC101 0.98 OKFHMN_17565 aroE shikimate dehydrogenase 1.00 OKFHMN_14625 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC98 0.98 JDDGAC_21185 aroE shikimate dehydrogenase 1.00 JDDGAC_18245 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC99 0.98 KEDOAH_10585 aroE shikimate dehydrogenase 1.00 KEDOAH_13525 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC101 0.98 MCAODC_08085 aroE shikimate dehydrogenase 1.00 MCAODC_05130 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC102 0.98 NIAGMN_15325 aroE shikimate dehydrogenase 1.00 NIAGMN_12380 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECOR38 0.97 HEPCGN_16385 aroE shikimate dehydrogenase 1.00 HEPCGN_13335 ilvC ketol-acid reductoisomerase low > 85
Escherichia coli Nissle 1917 0.97 ECOLIN_RS18840 shikimate dehydrogenase 1.00 ECOLIN_RS21680 ketol-acid reductoisomerase low > 52
Escherichia fergusonii Becca 0.96 EFB2_00542 Shikimate dehydrogenase (NADP(+)) 1.00 EFB2_04862 Ketol-acid reductoisomerase (NADP(+)) low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.99 GFF2896 Ketol-acid reductoisomerase (EC 1.1.1.86) low > 78
Enterobacter sp. TBS_079 0.82 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) 0.95 MPMX20_04496 Ketol-acid reductoisomerase (NADP(+)) 0.90 7
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0046 shikimate dehydrogenase 0.95 EX28DRAFT_4446 ketol-acid reductoisomerase (EC 1.1.1.86) low > 76
Klebsiella michiganensis M5al 0.81 BWI76_RS25645 shikimate dehydrogenase 0.96 BWI76_RS00990 ketol-acid reductoisomerase 0.79 16
Serratia liquefaciens MT49 0.66 IAI46_23240 shikimate dehydrogenase 0.90 IAI46_24325 ketol-acid reductoisomerase 0.61 44
Pantoea sp. MT58 0.66 IAI47_02315 shikimate dehydrogenase 0.90 IAI47_01050 ketol-acid reductoisomerase — —
Erwinia tracheiphila SCR3 0.64 LU632_RS22445 aroE shikimate dehydrogenase 0.90 LU632_RS24385 ilvC ketol-acid reductoisomerase 0.56 30
Pectobacterium carotovorum WPP14 0.62 HER17_RS02250 shikimate dehydrogenase 0.89 HER17_RS01100 ketol-acid reductoisomerase 0.94 22
Rahnella sp. WP5 0.62 EX31_RS15950 shikimate dehydrogenase 0.90 EX31_RS15020 ketol-acid reductoisomerase — —
Dickeya dadantii 3937 0.61 DDA3937_RS19100 shikimate dehydrogenase 0.89 DDA3937_RS20130 ketol-acid reductoisomerase — —
Dickeya dianthicola 67-19 0.61 HGI48_RS19190 shikimate dehydrogenase 0.89 HGI48_RS20270 ketol-acid reductoisomerase — —
Dickeya dianthicola ME23 0.60 DZA65_RS20315 shikimate dehydrogenase 0.89 DZA65_RS21310 ketol-acid reductoisomerase — —
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_00280 shikimate dehydrogenase 0.76 CSW01_00840 ketol-acid reductoisomerase low > 62
Shewanella sp. ANA-3 0.48 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) 0.74 Shewana3_0355 ketol-acid reductoisomerase (RefSeq) 0.93 11
Shewanella oneidensis MR-1 0.48 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) 0.74 SO4349 ilvC ketol-acid reductoisomerase (NCBI ptt file) 0.88 26
Shewanella loihica PV-4 0.47 Shew_3727 shikimate 5-dehydrogenase (RefSeq) 0.73 Shew_0288 ketol-acid reductoisomerase (RefSeq) 0.81 22
Shewanella amazonensis SB2B 0.43 Sama_0052 shikimate dehydrogenase (RefSeq) 0.75 Sama_3282 ketol-acid reductoisomerase (RefSeq) 0.71 27
Alteromonas macleodii MIT1002 0.31 MIT1002_00029 Shikimate dehydrogenase 0.73 MIT1002_04045 Ketol-acid reductoisomerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.71 CA265_RS15825 ketol-acid reductoisomerase — —

Not shown: 59 genomes with orthologs for b3281 only; 0 genomes with orthologs for b3774 only