Conservation of cofitness between b0004 and b3774 in Escherichia coli BW25113

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0004 thrC threonine synthase (NCBI) 1.0 b3774 ilvC ketol-acid reductoisomerase (NCBI) 0.92 15
Escherichia coli ECRC101 1.00 OKFHMN_11100 thrC threonine synthase 1.00 OKFHMN_14625 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC99 1.00 KEDOAH_17055 thrC threonine synthase 1.00 KEDOAH_13525 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC98 1.00 JDDGAC_14695 thrC threonine synthase 1.00 JDDGAC_18245 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECRC62 1.00 BNILDI_08170 thrC threonine synthase 1.00 BNILDI_04765 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECOR27 1.00 NOLOHH_03430 thrC threonine synthase 1.00 NOLOHH_06760 ilvC ketol-acid reductoisomerase low > 57
Escherichia coli ECRC101 1.00 MCAODC_01615 thrC threonine synthase 1.00 MCAODC_05130 ilvC ketol-acid reductoisomerase — —
Escherichia fergusonii Becca 1.00 EFB2_04039 Threonine synthase 1.00 EFB2_04862 Ketol-acid reductoisomerase (NADP(+)) low > 86
Escherichia coli ECRC102 1.00 NIAGMN_08950 thrC threonine synthase 1.00 NIAGMN_12380 ilvC ketol-acid reductoisomerase — —
Escherichia coli BL21 1.00 ECD_00004 L-threonine synthase 1.00 ECD_03652 ketol-acid reductoisomerase, NAD(P)-binding 0.59 30
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03656 Threonine synthase 1.00 OHPLBJKB_04279 Ketol-acid reductoisomerase (NADP(+)) low > 73
Escherichia coli ECOR38 0.99 HEPCGN_09105 thrC threonine synthase 1.00 HEPCGN_13335 ilvC ketol-acid reductoisomerase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00020 threonine synthase 1.00 ECOLIN_RS21680 ketol-acid reductoisomerase low > 52
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3616 threonine synthase 0.95 EX28DRAFT_4446 ketol-acid reductoisomerase (EC 1.1.1.86) 0.61 5
Enterobacter sp. TBS_079 0.93 MPMX20_00712 Threonine synthase 0.95 MPMX20_04496 Ketol-acid reductoisomerase (NADP(+)) 0.94 4
Klebsiella michiganensis M5al 0.92 BWI76_RS04255 threonine synthase 0.96 BWI76_RS00990 ketol-acid reductoisomerase 0.94 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1080 Threonine synthase (EC 4.2.3.1) 0.99 GFF2896 Ketol-acid reductoisomerase (EC 1.1.1.86) low > 78
Rahnella sp. WP5 0.85 EX31_RS03935 threonine synthase 0.90 EX31_RS15020 ketol-acid reductoisomerase 0.99 2
Serratia liquefaciens MT49 0.84 IAI46_03040 threonine synthase 0.90 IAI46_24325 ketol-acid reductoisomerase 0.80 23
Pantoea sp. MT58 0.81 IAI47_16205 threonine synthase 0.90 IAI47_01050 ketol-acid reductoisomerase 0.96 3
Dickeya dadantii 3937 0.80 DDA3937_RS18405 threonine synthase 0.89 DDA3937_RS20130 ketol-acid reductoisomerase 0.90 4
Dickeya dianthicola ME23 0.80 DZA65_RS19475 threonine synthase 0.89 DZA65_RS21310 ketol-acid reductoisomerase 0.69 13
Erwinia tracheiphila SCR3 0.79 LU632_RS02620 thrC threonine synthase 0.90 LU632_RS24385 ilvC ketol-acid reductoisomerase — —
Dickeya dianthicola 67-19 0.79 HGI48_RS18335 threonine synthase 0.89 HGI48_RS20270 ketol-acid reductoisomerase 0.72 10
Pectobacterium carotovorum WPP14 0.79 HER17_RS02805 threonine synthase 0.89 HER17_RS01100 ketol-acid reductoisomerase 0.93 19
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_11965 threonine synthase 0.76 CSW01_00840 ketol-acid reductoisomerase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_03084 Threonine synthase 0.73 MIT1002_04045 Ketol-acid reductoisomerase 0.94 25
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.73 Shew_0288 ketol-acid reductoisomerase (RefSeq) 0.98 15
Shewanella sp. ANA-3 0.56 Shewana3_1141 threonine synthase (RefSeq) 0.74 Shewana3_0355 ketol-acid reductoisomerase (RefSeq) 0.96 6
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.74 SO4349 ilvC ketol-acid reductoisomerase (NCBI ptt file) 0.98 2
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.75 Sama_3282 ketol-acid reductoisomerase (RefSeq) 0.97 3
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS23465 threonine synthase 0.71 CA265_RS15825 ketol-acid reductoisomerase 0.89 2

Not shown: 62 genomes with orthologs for b0004 only; 0 genomes with orthologs for b3774 only