Conservation of cofitness between b2616 and b2184 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2616 recN recombination and repair protein (NCBI) 1.0 b2184 yejH DNA damage response helicase (yejH or radD) (from data) 0.61 2
Escherichia coli ECRC62 1.00 BNILDI_11620 recN DNA repair protein RecN 0.99 BNILDI_13850 radD Putative DNA repair helicase RadD — —
Escherichia coli ECOR27 1.00 NOLOHH_12815 recN DNA repair protein RecN 0.99 NOLOHH_14930 radD Putative DNA repair helicase RadD low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01091 DNA repair protein RecN 1.00 OHPLBJKB_01525 Putative DNA repair helicase RadD low > 73
Escherichia coli BL21 1.00 ECD_02504 recombination and repair protein 1.00 ECD_02114 putative ATP-dependent DNA or RNA helicase low > 60
Escherichia coli ECRC102 0.99 NIAGMN_18915 recN DNA repair protein RecN 1.00 NIAGMN_21120 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC101 0.99 MCAODC_11670 recN DNA repair protein RecN 1.00 MCAODC_14405 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC99 0.99 KEDOAH_07075 recN DNA repair protein RecN 1.00 KEDOAH_04830 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC101 0.99 OKFHMN_21145 recN DNA repair protein RecN 1.00 OKFHMN_23355 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC98 0.99 JDDGAC_24810 recN DNA repair protein RecN 1.00 JDDGAC_27315 radD Putative DNA repair helicase RadD — —
Escherichia fergusonii Becca 0.99 EFB2_01277 DNA repair protein RecN 0.99 EFB2_01672 Putative DNA repair helicase RadD low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20265 recN DNA repair protein RecN 1.00 HEPCGN_22620 radD Putative DNA repair helicase RadD low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14775 DNA repair protein RecN 0.99 ECOLIN_RS12765 DEAD/DEAH box helicase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4162 DNA repair protein RecN 0.96 GFF3752 ATP-dependent RNA helicase YejH low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2719 DNA repair protein RecN 0.92 EX28DRAFT_0377 DNA or RNA helicases of superfamily II low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03486 DNA repair protein RecN 0.92 MPMX20_03150 Putative DNA repair helicase RadD low > 85
Klebsiella michiganensis M5al 0.84 BWI76_RS21560 DNA repair protein RecN 0.92 BWI76_RS19815 ATP-dependent helicase low > 92
Serratia liquefaciens MT49 0.77 IAI46_19635 DNA repair protein RecN 0.82 IAI46_17350 DEAD/DEAH box helicase family protein low > 86
Pantoea sp. MT58 0.77 IAI47_04810 DNA repair protein RecN 0.83 IAI47_06580 DEAD/DEAH box helicase low > 76
Rahnella sp. WP5 0.75 EX31_RS21760 DNA repair protein RecN 0.81 EX31_RS19200 DEAD/DEAH box helicase low > 89
Dickeya dadantii 3937 0.73 DDA3937_RS04325 DNA repair protein RecN 0.79 DDA3937_RS09150 DEAD/DEAH box helicase low > 74
Erwinia tracheiphila SCR3 0.73 LU632_RS16985 recN DNA repair protein RecN 0.79 LU632_RS17600 DEAD/DEAH box helicase low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS04320 DNA repair protein RecN 0.77 HGI48_RS09190 DEAD/DEAH box helicase low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS04235 DNA repair protein RecN 0.77 DZA65_RS09490 DEAD/DEAH box helicase low > 75
Pectobacterium carotovorum WPP14 0.72 HER17_RS17420 DNA repair protein RecN 0.80 HER17_RS12960 DEAD/DEAH box helicase family protein low > 75
Shewanella oneidensis MR-1 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.53 SO2744 DNA damage response helicase (yejH or radD) (from data) 0.36 22
Shewanella sp. ANA-3 0.55 Shewana3_1104 recombination and repair protein (RefSeq) 0.53 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.51 Sama_2080 DNA damage response helicase (yejH or radD) (from data) 0.56 13
Shewanella loihica PV-4 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.52 Shew_1532 type III restriction enzyme, res subunit (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_04395 DNA repair protein RecN 0.60 CSW01_08225 ATP-dependent helicase low > 62
Marinobacter adhaerens HP15 0.40 HP15_3084 DNA repair protein RecN 0.59 HP15_2832 DNA damage response helicase (yejH or radD) (from data) 0.61 22

Not shown: 69 genomes with orthologs for b2616 only; 0 genomes with orthologs for b2184 only