Conservation of cofitness between b2565 and b2184 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2565 recO DNA repair protein RecO (NCBI) 1.0 b2184 yejH DNA damage response helicase (yejH or radD) (from data) 0.51 13
Escherichia coli ECRC99 1.00 KEDOAH_06800 recO DNA repair protein RecO 1.00 KEDOAH_04830 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC102 1.00 NIAGMN_19190 recO DNA repair protein RecO 1.00 NIAGMN_21120 radD Putative DNA repair helicase RadD — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14520 DNA repair protein RecO 0.99 ECOLIN_RS12765 DEAD/DEAH box helicase — —
Escherichia coli ECRC98 1.00 JDDGAC_25085 recO DNA repair protein RecO 1.00 JDDGAC_27315 radD Putative DNA repair helicase RadD — —
Escherichia coli BL21 1.00 ECD_02459 gap repair protein 1.00 ECD_02114 putative ATP-dependent DNA or RNA helicase low > 60
Escherichia coli ECRC101 1.00 OKFHMN_21420 recO DNA repair protein RecO 1.00 OKFHMN_23355 radD Putative DNA repair helicase RadD — —
Escherichia coli ECRC101 1.00 MCAODC_11950 recO DNA repair protein RecO 1.00 MCAODC_14405 radD Putative DNA repair helicase RadD — —
Escherichia coli ECOR38 1.00 HEPCGN_20565 recO DNA repair protein RecO 1.00 HEPCGN_22620 radD Putative DNA repair helicase RadD low > 85
Escherichia coli ECOR27 1.00 NOLOHH_13095 recO DNA repair protein RecO 0.99 NOLOHH_14930 radD Putative DNA repair helicase RadD low > 57
Escherichia fergusonii Becca 1.00 EFB2_01331 DNA repair protein RecO 0.99 EFB2_01672 Putative DNA repair helicase RadD low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01142 DNA repair protein RecO 1.00 OHPLBJKB_01525 Putative DNA repair helicase RadD low > 73
Escherichia coli ECRC62 1.00 BNILDI_11895 recO DNA repair protein RecO 0.99 BNILDI_13850 radD Putative DNA repair helicase RadD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF2473 DNA recombination and repair protein RecO 0.96 GFF3752 ATP-dependent RNA helicase YejH low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS21310 DNA repair protein RecO 0.92 BWI76_RS19815 ATP-dependent helicase low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_0081 DNA replication and repair protein RecO 0.92 EX28DRAFT_0377 DNA or RNA helicases of superfamily II low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_03436 DNA repair protein RecO 0.92 MPMX20_03150 Putative DNA repair helicase RadD low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS15725 DNA repair protein RecO 0.79 DDA3937_RS09150 DEAD/DEAH box helicase low > 74
Pantoea sp. MT58 0.80 IAI47_04890 DNA repair protein RecO 0.83 IAI47_06580 DEAD/DEAH box helicase low > 76
Dickeya dianthicola ME23 0.80 DZA65_RS16890 DNA repair protein RecO 0.77 DZA65_RS09490 DEAD/DEAH box helicase low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS15810 DNA repair protein RecO 0.77 HGI48_RS09190 DEAD/DEAH box helicase low > 71
Erwinia tracheiphila SCR3 0.78 LU632_RS15375 recO DNA repair protein RecO 0.79 LU632_RS17600 DEAD/DEAH box helicase low > 74
Rahnella sp. WP5 0.78 EX31_RS21845 DNA repair protein RecO 0.81 EX31_RS19200 DEAD/DEAH box helicase low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS05825 DNA repair protein RecO 0.80 HER17_RS12960 DEAD/DEAH box helicase family protein low > 75
Serratia liquefaciens MT49 0.76 IAI46_19540 DNA repair protein RecO 0.82 IAI46_17350 DEAD/DEAH box helicase family protein low > 86
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_12445 DNA repair protein RecO 0.60 CSW01_08225 ATP-dependent helicase low > 62
Marinobacter adhaerens HP15 0.31 HP15_786 DNA repair protein RecO 0.59 HP15_2832 DNA damage response helicase (yejH or radD) (from data) 0.40 33
Shewanella loihica PV-4 0.29 Shew_1056 DNA repair protein RecO (RefSeq) 0.52 Shew_1532 type III restriction enzyme, res subunit (RefSeq) low > 60
Shewanella oneidensis MR-1 0.29 SO1350 recO DNA repair protein RecO (NCBI ptt file) 0.53 SO2744 DNA damage response helicase (yejH or radD) (from data) 0.32 32
Shewanella sp. ANA-3 0.28 Shewana3_3024 DNA repair protein RecO (RefSeq) 0.53 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) low > 73
Shewanella amazonensis SB2B 0.28 Sama_0882 DNA repair protein RecO (RefSeq) 0.51 Sama_2080 DNA damage response helicase (yejH or radD) (from data) 0.46 21

Not shown: 33 genomes with orthologs for b2565 only; 0 genomes with orthologs for b2184 only