Conservation of cofitness between b0779 and b2184 in Escherichia coli BW25113

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0779 uvrB excinuclease ABC subunit B (NCBI) 1.0 b2184 yejH DNA damage response helicase (yejH or radD) (from data) 0.48 12
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04150 excinuclease ABC subunit UvrB 0.99 ECOLIN_RS12765 DEAD/DEAH box helicase low > 55
Escherichia coli ECRC101 1.00 MCAODC_25595 uvrB excinuclease ABC subunit UvrB 1.00 MCAODC_14405 radD Putative DNA repair helicase RadD low > 87
Escherichia coli ECRC98 1.00 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB 1.00 JDDGAC_27315 radD Putative DNA repair helicase RadD low > 86
Escherichia coli ECOR27 1.00 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB 0.99 NOLOHH_14930 radD Putative DNA repair helicase RadD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02934 UvrABC system protein B 1.00 OHPLBJKB_01525 Putative DNA repair helicase RadD low > 73
Escherichia coli ECRC100 1.00 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB 1.00 OKFHMN_23355 radD Putative DNA repair helicase RadD low > 80
Escherichia coli ECRC102 1.00 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB 1.00 NIAGMN_21120 radD Putative DNA repair helicase RadD — —
Escherichia coli ECOR38 1.00 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB 1.00 HEPCGN_22620 radD Putative DNA repair helicase RadD low > 87
Escherichia coli ECRC62 1.00 BNILDI_21020 uvrB excinuclease ABC subunit UvrB 0.99 BNILDI_13850 radD Putative DNA repair helicase RadD low > 75
Escherichia coli ECRC99 1.00 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB 1.00 KEDOAH_04830 radD Putative DNA repair helicase RadD — —
Escherichia coli BL21 1.00 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component 1.00 ECD_02114 putative ATP-dependent DNA or RNA helicase 0.65 13
Escherichia fergusonii Becca 1.00 EFB2_03326 UvrABC system protein B 0.99 EFB2_01672 Putative DNA repair helicase RadD low > 86
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2211 Excinuclease ABC subunit B 0.92 EX28DRAFT_0377 DNA or RNA helicases of superfamily II low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01408 UvrABC system protein B 0.92 MPMX20_03150 Putative DNA repair helicase RadD low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS08785 excinuclease ABC subunit B 0.92 BWI76_RS19815 ATP-dependent helicase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF675 Excinuclease ABC subunit B 0.96 GFF3752 ATP-dependent RNA helicase YejH low > 78
Erwinia tracheiphila SCR3 0.90 LU632_RS09160 uvrB excinuclease ABC subunit B 0.79 LU632_RS17600 DEAD/DEAH box helicase low > 74
Erwinia amylovora T8 0.89 OLJFJH_16735 excinuclease ABC subunit UvrB 0.81 OLJFJH_11705 ATP-dependent helicase low > 58
Pantoea sp. MT58 0.89 IAI47_13505 excinuclease ABC subunit B 0.83 IAI47_06580 DEAD/DEAH box helicase low > 76
Pectobacterium carotovorum WPP14 0.88 HER17_RS13420 excinuclease ABC subunit B 0.80 HER17_RS12960 DEAD/DEAH box helicase family protein low > 75
Serratia liquefaciens MT49 0.88 IAI46_06550 excinuclease ABC subunit B 0.82 IAI46_17350 DEAD/DEAH box helicase family protein low > 86
Rahnella sp. WP5 0.87 EX31_RS23720 excinuclease ABC subunit B 0.81 EX31_RS19200 DEAD/DEAH box helicase low > 89
Dickeya dadantii 3937 0.87 DDA3937_RS08530 excinuclease ABC subunit B 0.79 DDA3937_RS09150 DEAD/DEAH box helicase low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS08990 excinuclease ABC subunit B 0.77 DZA65_RS09490 DEAD/DEAH box helicase low > 75
Dickeya dianthicola 67-19 0.86 HGI48_RS08695 excinuclease ABC subunit B 0.77 HGI48_RS09190 DEAD/DEAH box helicase low > 71
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_05185 excinuclease ABC subunit UvrB 0.60 CSW01_08225 ATP-dependent helicase low > 62
Shewanella oneidensis MR-1 0.75 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) 0.53 SO2744 DNA damage response helicase (yejH or radD) (from data) 0.51 8
Shewanella sp. ANA-3 0.74 Shewana3_2166 excinuclease ABC subunit B (RefSeq) 0.53 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) low > 73
Shewanella amazonensis SB2B 0.74 Sama_1828 excinuclease ABC subunit B (RefSeq) 0.51 Sama_2080 DNA damage response helicase (yejH or radD) (from data) 0.47 13
Shewanella loihica PV-4 0.74 Shew_2064 excinuclease ABC subunit B (RefSeq) 0.52 Shew_1532 type III restriction enzyme, res subunit (RefSeq) low > 60
Marinobacter adhaerens HP15 0.69 HP15_1372 excinuclease ABC subunit B 0.59 HP15_2832 DNA damage response helicase (yejH or radD) (from data) 0.57 22

Not shown: 76 genomes with orthologs for b0779 only; 0 genomes with orthologs for b2184 only