Conservation of cofitness between b0157 and b0237 in Escherichia coli BW25113

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0157 yadS conserved inner membrane protein (NCBI) 1.0 b0237 pepD aminoacyl-histidine dipeptidase (peptidase D) (NCBI) 0.24 7
Escherichia coli ECOR38 1.00 HEPCGN_08225 yadS UPF0126 inner membrane protein YadS 0.99 HEPCGN_07805 pepD cytosol nonspecific dipeptidase low > 85
Escherichia coli BL21 1.00 ECD_00156 UPF0126 family inner membrane protein 0.99 ECD_00232 aminoacyl-histidine dipeptidase (peptidase D) low > 60
Escherichia coli ECRC99 1.00 KEDOAH_17880 yadS UPF0126 inner membrane protein YadS 0.99 KEDOAH_18455 pepD cytosol nonspecific dipeptidase — —
Escherichia fergusonii Becca 1.00 EFB2_03887 hypothetical protein 0.99 EFB2_03783 Cytosol non-specific dipeptidase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00875 TRIC cation channel family protein 0.99 ECOLIN_RS01800 cytosol nonspecific dipeptidase low > 52
Escherichia coli ECRC62 1.00 BNILDI_09050 yadS UPF0126 inner membrane protein YadS 1.00 BNILDI_00270 pepD cytosol nonspecific dipeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03505 hypothetical protein 1.00 OHPLBJKB_03403 Cytosol non-specific dipeptidase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_02620 yadS UPF0126 inner membrane protein YadS 1.00 NOLOHH_02075 pepD cytosol nonspecific dipeptidase low > 57
Escherichia coli ECRC101 1.00 MCAODC_00790 yadS UPF0126 inner membrane protein YadS 0.99 MCAODC_00220 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC102 1.00 NIAGMN_08125 yadS UPF0126 inner membrane protein YadS 0.99 NIAGMN_07560 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC98 1.00 JDDGAC_13870 yadS UPF0126 inner membrane protein YadS 0.99 JDDGAC_13325 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC101 1.00 OKFHMN_10275 yadS UPF0126 inner membrane protein YadS 0.99 OKFHMN_09700 pepD cytosol nonspecific dipeptidase — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3746 Predicted membrane protein 0.89 EX28DRAFT_2656 Xaa-His dipeptidase low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00843 hypothetical protein 0.88 MPMX20_00922 Cytosol non-specific dipeptidase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF64 Putative inner membrane protein 0.93 GFF4108 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) low > 78
Klebsiella michiganensis M5al 0.89 BWI76_RS05160 hypothetical protein 0.93 BWI76_RS05540 cytosol nonspecific dipeptidase low > 92
Serratia liquefaciens MT49 0.81 IAI46_03565 TRIC cation channel family protein 0.78 IAI46_04410 beta-Ala-His dipeptidase low > 86
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_12060 hypothetical protein 0.65 CSW01_11600 aminoacyl-histidine dipeptidase low > 62
Shewanella loihica PV-4 0.55 Shew_1024 hypothetical protein (RefSeq) 0.61 Shew_2852 aminoacyl-histidine dipeptidase (RefSeq) low > 60
Shewanella sp. ANA-3 0.54 Shewana3_3055 hypothetical protein (RefSeq) 0.61 Shewana3_0950 M20C family Xaa-His dipeptidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO1319 putative transporter, required for glycine utilization (from data) 0.61 SO1115 pepD dipeptidase (EC 3.4.13.-) (from data) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0852 hypothetical protein (RefSeq) 0.63 Sama_2519 Xaa-His dipeptidase (RefSeq) low > 62
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03975 hypothetical protein 0.46 BACOVA_04354 Xaa-His dipeptidase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.32 BT1201 conserved hypothetical protein (NCBI ptt file) 0.46 BT1615 aminoacyl-histidine dipeptidase (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.31 HMPREF1181_RS16955 trimeric intracellular cation channel family protein 0.47 HMPREF1181_RS09110 aminoacyl-histidine dipeptidase low > 56
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS17455 trimeric intracellular cation channel family protein 0.43 ABI39_RS09790 aminoacyl-histidine dipeptidase low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS03765 trimeric intracellular cation channel family protein 0.42 HMPREF1058_RS14140 aminoacyl-histidine dipeptidase low > 67
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS08780 trimeric intracellular cation channel family protein 0.46 HMPREF1078_RS04870 aminoacyl-histidine dipeptidase low > 61

Not shown: 13 genomes with orthologs for b0157 only; 10 genomes with orthologs for b0237 only