Conservation of cofitness between Rru_A1435 and Rru_A3677 in Rhodospirillum rubrum S1H
11 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rhodospirillum rubrum S1H | 1.0 | Rru_A1435 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | 1.0 | Rru_A3677 | | Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) | 0.68 | 19 |
Castellaniella sp019104865 MT123 | 0.57 | ABCV34_RS02725 | | sigma-54 dependent transcriptional regulator | 0.46 | ABCV34_RS13975 | | TRAP transporter small permease | low | > 48 |
Azospirillum brasilense Sp245 | 0.51 | AZOBR_RS21130 | | Fis family transcriptional regulator | 0.63 | AZOBR_RS09600 | | C4-dicarboxylate ABC transporter permease | low | > 97 |
Pseudomonas stutzeri RCH2 | 0.49 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | 0.12 | Psest_4269 | | C4-dicarboxylate transporter, DctQ subunit (from data) | low | > 67 |
Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS16810 | | Fis family transcriptional regulator | 0.46 | HSERO_RS04245 | | C4-dicarboxylate ABC transporter permease | low | > 78 |
Dechlorosoma suillum PS | 0.48 | Dsui_3467 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.60 | Dsui_3154 | | TRAP-type C4-dicarboxylate transport system, small permease component | low | > 51 |
Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_09635 | | sigma-54-dependent Fis family transcriptional regulator | 0.17 | CSW01_09645 | | C4-dicarboxylate ABC transporter permease | low | > 62 |
Magnetospirillum magneticum AMB-1 | 0.47 | AMB_RS08380 | | sigma-54-dependent Fis family transcriptional regulator | 0.74 | AMB_RS04555 | | TRAP transporter small permease | low | > 64 |
Shewanella sp. ANA-3 | 0.46 | Shewana3_1412 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | 0.16 | Shewana3_1415 | | tripartite ATP-independent periplasmic transporter DctQ (RefSeq) | 0.91 | 1 |
Shewanella amazonensis SB2B | 0.45 | Sama_2213 | | response regulator receiver protein (RefSeq) | 0.16 | Sama_2210 | | alpha-ketoglutarate TRAP transporter, small permease component (from data) | 0.77 | 4 |
Dinoroseobacter shibae DFL-12 | 0.41 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.12 | Dshi_1833 | | Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) | low | > 64 |
Phaeobacter inhibens DSM 17395 | 0.32 | PGA1_c13440 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | 0.13 | PGA1_c20670 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) | — | — |
Not shown: 41 genomes with orthologs for Rru_A1435 only; 1 genomes with orthologs for Rru_A3677 only