Conservation of cofitness between Rru_A3203 and Rru_A0217 in Rhodospirillum rubrum S1H

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A3203 ribonuclease R (NCBI) 1.0 Rru_A0217 Citrate lyase (NCBI) 0.66 12
Magnetospirillum magneticum AMB-1 0.48 AMB_RS04465 ribonuclease R 0.31 AMB_RS20125 CoA ester lyase low > 64
Phaeobacter inhibens DSM 17395 0.39 PGA1_c36430 putative ribonuclease R 0.52 PGA1_c30490 Malyl-CoA lyase (EC 4.1.3.24) (from data) low > 62
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_02537 ribonuclease R 0.32 CCNA_03094 citrate lyase beta subunit low > 67
Caulobacter crescentus NA1000 0.38 CCNA_02537 ribonuclease R 0.32 CCNA_03094 citrate lyase beta subunit low > 66
Dinoroseobacter shibae DFL-12 0.34 Dshi_0015 ribonuclease R (RefSeq) 0.51 Dshi_3050 Citrate (pro-3S)-lyase (RefSeq) low > 64
Bosea sp. OAE506 0.33 ABIE41_RS18140 ribonuclease R 0.34 ABIE41_RS15850 CoA ester lyase low > 77
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS08270 ribonuclease R 0.21 ABZR86_RS14500 CoA ester lyase low > 74
Ralstonia solanacearum GMI1000 0.24 RS_RS06155 ribonuclease R 0.09 RS_RS10045 CoA ester lyase low > 80
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18030 ribonuclease R 0.10 RPSI07_RS14650 CoA ester lyase low > 81
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS10985 ribonuclease R 0.08 ABZR87_RS14585 CoA ester lyase low > 80
Ralstonia solanacearum UW163 0.24 UW163_RS12810 ribonuclease R 0.08 UW163_RS11060 CoA ester lyase — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS15345 ribonuclease R 0.08 RALBFv3_RS02665 CoA ester lyase — —
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R 0.17 Pf6N2E2_1831 Citrate lyase beta chain (EC 4.1.3.6) low > 103
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS13065 ribonuclease R 0.37 RR42_RS24325 citryl-CoA lyase low > 128
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.21 GFF3075 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) low > 78
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_00712 RNAse R 0.33 H281DRAFT_02940 beta-methylmalyl-CoA/L-malyl-CoA lyase (EC 4.1.3.24) low > 103
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22925 ribonuclease R 0.65 QEN71_RS33980 CoA ester lyase low > 153

Not shown: 62 genomes with orthologs for Rru_A3203 only; 3 genomes with orthologs for Rru_A0217 only