Homologs of PS417_20295 from Pseudomonas simiae WCS417

RNA-directed DNA polymerase
SEED: Reverse transcriptase

40 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_20295 RNA-directed DNA polymerase insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS30560 RNA-directed DNA polymerase insig. 52 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS30560 RNA-directed DNA polymerase insig. 52 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3003.1 hypothetical protein insig. 41 97
  Bacteroides ovatus ATCC 8483 BACOVA_05160 reverse transcriptase (RNA-dependent DNA polymerase) insig. 32 85
  Bacteroides thetaiotaomicron VPI-5482 BT4342 RNA-directed DNA polymerase (NCBI ptt file) sig. 30 76
o Kangiella aquimarina DSM 16071 B158DRAFT_1352 Retron-type reverse transcriptase insig. 29 82
  Escherichia coli BL21 ECD_00831 retron EC86 RNA-directed DNA polymerase-like protein sig. 27 77
  Burkholderia phytofirmans PsJN BPHYT_RS00090 reverse transcriptase insig. 31 76
o Pseudomonas segetis P6 ACVTMO_RS02455 reverse transcriptase domain-containing protein insig. 27 90
  Enterobacter asburiae PDN3 EX28DRAFT_2109 Reverse transcriptase (RNA-dependent DNA polymerase) cofit 29 76
  Cellulophaga baltica 18 M666_RS15890 reverse transcriptase family protein insig. 26 94
  Variovorax sp. SCN45 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 33 61
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04565 hypothetical protein insig. 27 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.757.1 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 29 68
  Escherichia coli ECOR38 HEPCGN_14425 RNA-directed DNA polymerase insig. 27 72
  Acidovorax sp. GW101-3H11 Ac3H11_2124 Reverse transcriptase insig. 32 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1746 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no data 27 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_12075 RNA-directed DNA polymerase insig. 25 77
  Dickeya dianthicola ME23 DZA65_RS02140 RNA-directed DNA polymerase insig. 24 80
  Pectobacterium carotovorum WPP14 HER17_RS10435 retron St85 family RNA-directed DNA polymerase insig. 25 76
  Dickeya dianthicola 67-19 HGI48_RS00180 RNA-directed DNA polymerase insig. 23 76
  Variovorax sp. SCN45 GFF3411 hypothetical protein insig. 26 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03575 hypothetical protein cofit 27 60
  Pseudomonas sp. BP01 JOY50_RS26315 retron St85 family RNA-directed DNA polymerase insig. 23 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1015 Retron-type reverse transcriptase sig. 25 71
  Herbaspirillum seropedicae SmR1 HSERO_RS14565 hypothetical protein insig. 25 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2149 Retron-type reverse transcriptase no data 25 71
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4041 Retron-type reverse transcriptase no data 25 71
  Alteromonas macleodii MIT1002 MIT1002_00571 Group II intron-encoded protein LtrA no data 25 61
  Rhodanobacter denitrificans MT42 LRK55_RS11725 group II intron reverse transcriptase/maturase no data 32 26
  Rhodanobacter denitrificans MT42 LRK55_RS11730 group II intron reverse transcriptase/maturase no data 32 26
  Alteromonas macleodii MIT1002 MIT1002_00568 Group II intron-encoded protein LtrA no data 25 61
  Alteromonas macleodii MIT1002 MIT1002_02239 Group II intron-encoded protein LtrA no data 25 61
  Pseudomonas putida KT2440 PP_1846 Group II intron-encoding maturase no data 26 40
  Pseudomonas putida KT2440 PP_3172 Group II intron-encoding maturase no data 26 40
  Pseudomonas putida KT2440 PP_3820 Group II intron-encoding maturase no data 26 40
  Pseudomonas putida KT2440 PP_1250 Group II intron-encoding maturase no data 26 40
  Pseudomonas putida KT2440 PP_1252 Group II intron-encoding maturase no data 26 40
  Pseudomonas putida KT2440 PP_1624 Group II intron-encoding maturase no data 26 40