Homologs of GFF1003 from Sphingobium sp. HT1-2

Rhamnogalacturonides degradation protein RhiN
SEED: Rhamnogalacturonides degradation protein RhiN

88 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF1003 Rhamnogalacturonides degradation protein RhiN insig. 100 100
o Alteromonas macleodii MIT1002 MIT1002_03307 Unsaturated rhamnogalacturonyl hydrolase YesR insig. 68 100
o Pectobacterium carotovorum WPP14 HER17_RS04175 glycoside hydrolase family 88 protein insig. 61 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05310 glycoside hydrolase family 105 protein insig. 62 99
o Dickeya dadantii 3937 DDA3937_RS16980 glycoside hydrolase family 88 protein insig. 62 98
o Rahnella sp. WP5 EX31_RS14145 glycosyl hydrolase family 88 insig. 60 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1658 Rhamnogalacturonides degradation protein RhiN insig. 61 99
o Dickeya dianthicola 67-19 HGI48_RS17045 glycoside hydrolase family 88 protein insig. 61 98
o Dickeya dianthicola ME23 DZA65_RS18120 glycosyl hydrolase family 88 insig. 61 98
o Pantoea sp. MT58 IAI47_12025 glycoside hydrolase family 88 protein insig. 62 98
o Klebsiella michiganensis M5al BWI76_RS18215 putative cytoplasmic protein insig. 60 98
o Klebsiella pneumoniae MKP103 KDGMDA_25485 glycoside hydrolase 105 family protein insig. 60 98
o Klebsiella pneumoniae MRSN742743 KFA93_RS07585 glycoside hydrolase family 105 protein insig. 60 98
o Enterobacter sp. TBS_079 MPMX20_02780 Unsaturated rhamnogalacturonyl hydrolase YesR insig. 59 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_10500 glycoside hydrolase 105 family protein cofit 57 98
o Erwinia tracheiphila SCR3 LU632_RS00620 glycoside hydrolase family 88 protein insig. 57 98
  Klebsiella michiganensis M5al BWI76_RS20985 glycosyl hydrolase family protein insig. 54 98
o Agrobacterium fabrum C58 Atu4561 hypothetical protein insig. 46 84
  Dickeya dianthicola 67-19 HGI48_RS17725 glycoside hydrolase family 88 protein insig. 46 84
  Dickeya dianthicola ME23 DZA65_RS18870 glycosyl hydrolase insig. 46 84
  Dickeya dadantii 3937 DDA3937_RS17730 glycoside hydrolase family 88 protein insig. 46 84
  Pectobacterium carotovorum WPP14 HER17_RS03510 glycoside hydrolase family 88 protein insig. 44 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12865 glycoside hydrolase family 105 protein insig. 29 79
  Bacteroides stercoris CC31F HMPREF1181_RS03475 glycoside hydrolase family 88 protein insig. 31 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12635 glycoside hydrolase family 105 protein insig. 35 53
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05520 family 88 glycosyl hydrolase insig. 27 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0918 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 27 75
  Bacteroides ovatus ATCC 8483 BACOVA_04900 glycosyl hydrolase, family 88 strong 28 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09280 glycoside hydrolase family 105 protein insig. 34 52
  Bacteroides thetaiotaomicron VPI-5482 BT1011 conserved hypothetical protein (NCBI ptt file) sig. 29 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3076 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 29 75
  Bacteroides thetaiotaomicron VPI-5482 BT4108 conserved hypothetical protein (NCBI ptt file) sig. 28 74
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17235 glycoside hydrolase family 88 protein strong 28 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1631 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 32 61
  Phocaeicola dorei CL03T12C01 ABI39_RS09475 glycoside hydrolase family 88 protein insig. 28 77
  Bacteroides ovatus ATCC 8483 BACOVA_04128 glycosyl hydrolase, family 88 strong 28 72
  Phocaeicola dorei CL03T12C01 ABI39_RS09055 glycoside hydrolase family 88 protein insig. 27 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13530 glycoside hydrolase family 88 protein insig. 27 76
  Bacteroides stercoris CC31F HMPREF1181_RS08935 glycoside hydrolase family 88 protein strong 26 77
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13870 glycoside hydrolase family 88 protein insig. 29 71
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19890 glucuronyl hydrolase insig. 26 85
  Bacteroides ovatus ATCC 8483 BACOVA_05004 glycosyl hydrolase, family 88 cofit 30 51
  Phocaeicola dorei CL03T12C01 ABI39_RS13235 glycoside hydrolase family 88 protein sig. 27 72
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11965 glycoside hydrolase family 88 protein insig. 24 71
  Phocaeicola dorei CL03T12C01 ABI39_RS04855 glycoside hydrolase family 88 protein insig. 24 71
  Alteromonas macleodii MIT1002 MIT1002_02447 Unsaturated rhamnogalacturonyl hydrolase YteR insig. 26 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02120 glycoside hydrolase family 105 protein insig. 26 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10505 glycoside hydrolase family 105 protein insig. 26 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3399 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 26 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13595 glycoside hydrolase family 88 protein insig. 24 85
  Bacteroides ovatus ATCC 8483 BACOVA_04975 glycosyl hydrolase, family 88 insig. 25 91
  Bacteroides stercoris CC31F HMPREF1181_RS03520 glycoside hydrolase family 88 protein insig. 23 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05320 glycosyl hydrolase insig. 28 52
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05640 glycoside hydrolase family 88 protein insig. 24 77
  Bacteroides thetaiotaomicron VPI-5482 BT4176 conserved hypothetical protein, putative cytoplasmic protein (NCBI ptt file) insig. 29 53
  Phocaeicola dorei CL03T12C01 ABI39_RS00810 glycoside hydrolase family 88 protein cofit 30 51
  Bacteroides ovatus ATCC 8483 BACOVA_02171 glycosyl hydrolase, family 88 cofit 23 77
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00830 glycoside hydrolase family 88 protein no data 29 51
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00970 glycoside hydrolase family 88 protein no data 29 51
  Bacteroides ovatus ATCC 8483 BACOVA_02108 glycosyl hydrolase, family 88 insig. 28 52
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09915 glycoside hydrolase family 88 protein insig. 29 47
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00085 glycoside hydrolase family 88 protein strong 26 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13805 family 88 glycosyl hydrolase insig. 31 40
  Phocaeicola dorei CL03T12C01 ABI39_RS00985 glycoside hydrolase family 88 protein sig. 25 68
  Bacteroides ovatus ATCC 8483 BACOVA_04973 glycosyl hydrolase, family 88 strong 29 45
  Bacteroides thetaiotaomicron VPI-5482 BT2921 conserved hypothetical protein (NCBI ptt file) insig. 25 48
  Bacteroides thetaiotaomicron VPI-5482 BT3687 conserved hypothetical protein (NCBI ptt file) strong 29 43
  Bacteroides thetaiotaomicron VPI-5482 BT2963 conserved hypothetical protein (NCBI ptt file) insig. 25 61
  Bacteroides ovatus ATCC 8483 BACOVA_04979 glycosyl hydrolase, family 88 insig. 28 43
  Bacteroides ovatus ATCC 8483 BACOVA_05031 glycosyl hydrolase, family 88 insig. 26 61
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08675 glycoside hydrolase family 105 protein insig. 24 81
  Bacteroides ovatus ATCC 8483 BACOVA_03494 glycosyl hydrolase, family 88 insig. 28 40
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13345 glycoside hydrolase insig. 25 64
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4071 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 27 57
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11145 glycoside hydrolase family 105 protein insig. 27 47
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1630 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 28 47
  Bacteroides thetaiotaomicron VPI-5482 BT4174 conserved hypothetical protein (NCBI ptt file) strong 26 43
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1643 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins insig. 25 63
  Bacteroides ovatus ATCC 8483 BACOVA_02718 glycosyl hydrolase, family 88 insig. 26 62
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07270 glycoside hydrolase family 105 protein insig. 27 40
  Agrobacterium fabrum C58 Atu3128 di-trans,poly-cis-decaprenylcistransferase sig. 29 51
  Phocaeicola dorei CL03T12C01 ABI39_RS02685 DUF2264 domain-containing protein insig. 26 40
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08460 DUF2264 domain-containing protein strong 26 40
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06065 family 88 glycosyl hydrolase sig. 27 40
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06285 glycoside hydrolase family 88 protein insig. 28 43
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03545 glycoside hydrolase family 88 protein insig. 25 40
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13465 glycoside hydrolase family 88 protein insig. 23 43
  Bacteroides ovatus ATCC 8483 BACOVA_02158 hypothetical protein insig. 29 24