Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Rhizobium sp. OAE497 | ABIE40_RS26600 | | L,D-transpeptidase | insig. | 100 | 100 |
| Bosea sp. OAE506 | ABIE41_RS14200 | | L,D-transpeptidase | insig. | 48 | 61 |
| Rhodopseudomonas palustris CGA009 | TX73_008305 | | L,D-transpeptidase | insig. | 51 | 58 |
| Rhodopseudomonas palustris CGA009 | TX73_021875 | | L,D-transpeptidase | insig. | 48 | 61 |
| Bosea sp. OAE506 | ABIE41_RS21100 | | L,D-transpeptidase | insig. | 45 | 66 |
| Rhodopseudomonas palustris CGA009 | TX73_024925 | | L,D-transpeptidase | insig. | 41 | 90 |
| Rhodopseudomonas palustris CGA009 | TX73_005880 | | L,D-transpeptidase | insig. | 42 | 78 |
| Bosea sp. OAE506 | ABIE41_RS22060 | | L,D-transpeptidase | insig. | 44 | 70 |
| Rhodopseudomonas palustris CGA009 | TX73_018715 | | L,D-transpeptidase family protein | no data | 45 | 61 |
| Rhodopseudomonas palustris CGA009 | TX73_018480 | | L,D-transpeptidase | insig. | 43 | 77 |
| Bosea sp. OAE506 | ABIE41_RS08190 | | L,D-transpeptidase | insig. | 50 | 61 |
| Rhizobium sp. OAE497 | ABIE40_RS03585 | | L,D-transpeptidase | insig. | 47 | 61 |
| Sinorhizobium meliloti 1021 | SMc00924 | | hypothetical protein | insig. | 47 | 61 |
| Agrobacterium fabrum C58 | Atu0669 | | hypothetical protein | insig. | 48 | 61 |
| Rhodopseudomonas palustris CGA009 | TX73_001100 | | L,D-transpeptidase | cofit | 42 | 68 |
| Azospirillum sp. SherDot2 | MPMX19_04296 | | hypothetical protein | insig. | 45 | 63 |
| Agrobacterium fabrum C58 | Atu2336 | | hypothetical protein | insig. | 40 | 67 |
| Rhizobium sp. OAE497 | ABIE40_RS13175 | | L,D-transpeptidase | insig. | 46 | 61 |
| Rhizobium sp. OAE497 | ABIE40_RS05790 | | L,D-transpeptidase | insig. | 40 | 80 |
| Sinorhizobium meliloti 1021 | SMc00925 | | signal peptide protein | insig. | 45 | 61 |
| Rhizobium sp. OAE497 | ABIE40_RS03580 | | L,D-transpeptidase | insig. | 45 | 61 |
| Rhodopseudomonas palustris CGA009 | TX73_023050 | | L,D-transpeptidase | sig. | 43 | 61 |
| Rhizobium sp. OAE497 | ABIE40_RS19495 | | L,D-transpeptidase | strong | 43 | 67 |
| Bosea sp. OAE506 | ABIE41_RS22050 | | L,D-transpeptidase | sig. | 40 | 82 |
| Agrobacterium fabrum C58 | Atu0048 | | hypothetical protein | strong | 45 | 61 |
| Sinorhizobium meliloti 1021 | SMc02582 | | hypothetical protein | strong | 36 | 88 |
| Dinoroseobacter shibae DFL-12 | Dshi_3781 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 43 | 61 |
| Dinoroseobacter shibae DFL-12 | Dshi_4057 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 43 | 61 |
| Phaeobacter inhibens DSM 17395 | PGA1_c17320 | | Uncharacterized protein conserved in bacteria | strong | 44 | 61 |
| Agrobacterium fabrum C58 | Atu0844 | | hypothetical protein | insig. | 37 | 79 |
| Bosea sp. OAE506 | ABIE41_RS10175 | | L,D-transpeptidase | insig. | 45 | 61 |
| Phaeobacter inhibens DSM 17395 | PGA1_c34770 | | Uncharacterized protein conserved in bacteria | sig. | 46 | 44 |
| Dinoroseobacter shibae DFL-12 | Dshi_3496 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | insig. | 36 | 63 |
| Sinorhizobium meliloti 1021 | SMc02636 | | hypothetical protein | strong | 41 | 61 |
| Sinorhizobium meliloti 1021 | SMc01200 | | hypothetical protein | sig. | 37 | 70 |
| Sinorhizobium meliloti 1021 | SMc04338 | | hypothetical protein | insig. | 42 | 61 |
| Phaeobacter inhibens DSM 17395 | PGA1_c26350 | | Uncharacterized protein conserved in bacteria | insig. | 41 | 61 |
| Rhizobium sp. OAE497 | ABIE40_RS04655 | | L,D-transpeptidase | insig. | 38 | 61 |
| Agrobacterium fabrum C58 | Atu0845 | | hypothetical protein | sig. | 33 | 86 |
| Pectobacterium carotovorum WPP14 | HER17_RS08950 | | L,D-transpeptidase family protein | cofit | 41 | 54 |
| Sinorhizobium meliloti 1021 | SMc00039 | | hypothetical protein | insig. | 38 | 61 |
| Dinoroseobacter shibae DFL-12 | Dshi_3595 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 37 | 61 |
| Dinoroseobacter shibae DFL-12 | Dshi_3933 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 37 | 61 |
| Rhizobium sp. OAE497 | ABIE40_RS04660 | | L,D-transpeptidase | insig. | 33 | 79 |
| Agrobacterium fabrum C58 | Atu5196 | | hypothetical protein | insig. | 34 | 68 |
| Klebsiella michiganensis M5al | BWI76_RS16970 | | murein L,D-transpeptidase | sig. | 44 | 51 |
| Dickeya dianthicola 67-19 | HGI48_RS12815 | | L,D-transpeptidase family protein | insig. | 43 | 50 |
| Dinoroseobacter shibae DFL-12 | Dshi_3598 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 32 | 97 |
| Dinoroseobacter shibae DFL-12 | Dshi_3936 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 32 | 97 |
| Agrobacterium fabrum C58 | Atu3331 | | hypothetical protein | insig. | 32 | 82 |
| Dickeya dianthicola ME23 | DZA65_RS13280 | | L,D-transpeptidase family protein | insig. | 43 | 50 |
| Escherichia coli BL21 | ECD_01647 | | murein L,D-transpeptidase | no data | 46 | 50 |
| Escherichia coli ECRC62 | BNILDI_16590 | ldtE | L,D-transpeptidase LdtE | insig. | 46 | 50 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02046 | | putative L,D-transpeptidase YnhG | insig. | 46 | 50 |
| Escherichia coli BW25113 | b1678 | ynhG | hypothetical protein (NCBI) | insig. | 46 | 50 |
| Escherichia fergusonii Becca | EFB2_02314 | | putative L,D-transpeptidase YnhG | insig. | 46 | 50 |
| Escherichia coli ECOR27 | NOLOHH_17800 | ldtE | L,D-transpeptidase LdtE | cofit | 46 | 50 |
| Escherichia coli ECOR38 | HEPCGN_05665 | ldtE | L,D-transpeptidase LdtE | insig. | 46 | 50 |
| Escherichia coli ECRC100 | OKFHMN_27280 | ldtE | L,D-transpeptidase LdtE | cofit | 46 | 50 |
| Escherichia coli ECRC101 | MCAODC_18130 | ldtE | L,D-transpeptidase LdtE | insig. | 46 | 50 |
| Escherichia coli ECRC102 | NIAGMN_00785 | ldtE | L,D-transpeptidase LdtE | insig. | 46 | 50 |
| Escherichia coli ECRC98 | JDDGAC_01855 | ldtE | L,D-transpeptidase LdtE | cofit | 46 | 50 |
| Escherichia coli ECRC99 | KEDOAH_00830 | ldtE | L,D-transpeptidase LdtE | no data | 46 | 50 |
| Escherichia coli Nissle 1917 | ECOLIN_RS09385 | | L,D-transpeptidase LdtE | insig. | 46 | 50 |
| Serratia liquefaciens MT49 | IAI46_11175 | | L,D-transpeptidase family protein | cofit | 41 | 55 |
| Dinoroseobacter shibae DFL-12 | Dshi_3406 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | insig. | 38 | 61 |
| Dinoroseobacter shibae DFL-12 | Dshi_3607 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 38 | 61 |
| Dinoroseobacter shibae DFL-12 | Dshi_3945 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | no data | 38 | 61 |
| Sinorhizobium meliloti 1021 | SM_b21516 | | hypothetical protein | strong | 34 | 79 |
| Enterobacter sp. TBS_079 | MPMX20_01794 | | putative L,D-transpeptidase YcfS | insig. | 36 | 67 |
| Pseudomonas stutzeri RCH2 | Psest_2334 | | Uncharacterized protein conserved in bacteria | strong | 42 | 52 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1817 | | Uncharacterized protein conserved in bacteria | insig. | 41 | 54 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | strong | 41 | 56 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | insig. | 41 | 56 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1681 | | Uncharacterized protein conserved in bacteria | insig. | 43 | 50 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_14325 | | peptidase | sig. | 39 | 56 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3564 | | L,D-transpeptidase YnhG | insig. | 44 | 50 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3396 | | L,D-transpeptidase YcfS | insig. | 44 | 50 |
| Escherichia coli BL21 | ECD_01109 | | L,D-transpeptidase linking Lpp to murein | insig. | 43 | 50 |
| Escherichia fergusonii Becca | EFB2_02862 | | putative L,D-transpeptidase YcfS | insig. | 43 | 50 |
| Escherichia coli ECOR27 | NOLOHH_21000 | ldtC | L,D-transpeptidase LdtC | insig. | 43 | 50 |
| Escherichia coli ECOR38 | HEPCGN_24010 | ldtC | L,D-transpeptidase LdtC | cofit | 43 | 50 |
| Escherichia coli ECRC100 | OKFHMN_03475 | ldtC | L,D-transpeptidase LdtC | insig. | 43 | 50 |
| Escherichia coli ECRC101 | MCAODC_22835 | ldtC | L,D-transpeptidase LdtC | insig. | 43 | 50 |
| Escherichia coli ECRC102 | NIAGMN_24355 | ldtC | L,D-transpeptidase LdtC | insig. | 43 | 50 |
| Escherichia coli ECRC62 | BNILDI_19165 | ldtC | L,D-transpeptidase LdtC | insig. | 43 | 50 |
| Escherichia coli ECRC98 | JDDGAC_07135 | ldtC | L,D-transpeptidase LdtC | cofit | 43 | 50 |
| Escherichia coli ECRC99 | KEDOAH_24280 | ldtC | L,D-transpeptidase LdtC | no data | 43 | 50 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02553 | | putative L,D-transpeptidase YcfS | insig. | 43 | 50 |
| Escherichia coli Nissle 1917 | ECOLIN_RS06420 | | L,D-transpeptidase LdtC | insig. | 43 | 50 |
| Escherichia coli BL21 | ECD_00786 | | L,D-transpeptidase linking Lpp to murein | strong | 38 | 61 |
| Escherichia fergusonii Becca | EFB2_03286 | | putative L,D-transpeptidase YbiS | cofit | 38 | 61 |
| Escherichia coli ECOR27 | NOLOHH_22515 | ldtB | L,D-transpeptidase | cofit | 38 | 61 |
| Escherichia coli ECOR38 | HEPCGN_01875 | ldtB | L,D-transpeptidase | strong | 38 | 61 |
| Escherichia coli ECRC100 | OKFHMN_06165 | ldtB | L,D-transpeptidase | cofit | 38 | 61 |
| Escherichia coli ECRC101 | MCAODC_25380 | ldtB | L,D-transpeptidase | cofit | 38 | 61 |
| Escherichia coli ECRC102 | NIAGMN_04210 | ldtB | L,D-transpeptidase | insig. | 38 | 61 |
| Escherichia coli ECRC62 | BNILDI_20795 | ldtB | L,D-transpeptidase | strong | 38 | 61 |
| Escherichia coli ECRC98 | JDDGAC_09800 | ldtB | L,D-transpeptidase | strong | 38 | 61 |
| Escherichia coli ECRC99 | KEDOAH_21745 | ldtB | L,D-transpeptidase | no data | 38 | 61 |