Conservation of cofitness between Xcc-8004.2711.1 and Xcc-8004.4611.1 in Xanthomonas campestris pv. campestris strain 8004

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2711.1 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 1.0 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.36 6
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_00810 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.24 AO353_17535 16S rRNA pseudouridine(516) synthase low > 101
Dechlorosoma suillum PS 0.53 Dsui_1826 NAD(P)H-dependent nitrite reductase, small subunit 0.28 Dsui_0824 pseudouridine synthase family protein — —
Pseudomonas sp. RS175 0.53 PFR28_01048 Assimilatory nitrite reductase [NAD(P)H] small subunit 0.23 PFR28_00665 Ribosomal small subunit pseudouridine synthase A — —
Pseudomonas stutzeri RCH2 0.52 Psest_1927 nitrite reductase [NAD(P)H], small subunit 0.25 Psest_3049 pseudouridine synthase — —
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_02775 nitrite reductase 0.24 AO356_04690 16S rRNA pseudouridine(516) synthase — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_2379 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.24 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4102 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.25 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) — —
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_3836 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.26 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3664 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.25 GFF5277 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) — —
Variovorax sp. OAS795 0.49 ABID97_RS20600 nitrite reductase small subunit NirD 0.28 ABID97_RS09900 16S rRNA pseudouridine(516) synthase — —
Magnetospirillum magneticum AMB-1 0.47 AMB_RS02740 nitrite reductase (NAD(P)H) small subunit 0.59 AMB_RS12445 rRNA pseudouridine synthase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_00652 nitrite reductase (NAD(P)H) small subunit 0.47 CCNA_01915 ribosomal small subunit pseudouridine synthase A low > 67
Caulobacter crescentus NA1000 0.40 CCNA_00652 nitrite reductase (NAD(P)H) small subunit 0.47 CCNA_01915 ribosomal small subunit pseudouridine synthase A low > 66
Ralstonia solanacearum PSI07 0.26 RPSI07_RS18835 non-heme iron oxygenase ferredoxin subunit 0.32 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase — —
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS11735 Rieske 2Fe-2S domain-containing protein 0.24 PFLU_RS07085 pseudouridine synthase low > 109
Pseudomonas fluorescens SBW25 0.25 PFLU_RS11735 Rieske 2Fe-2S domain-containing protein 0.24 PFLU_RS07085 pseudouridine synthase low > 109
Ralstonia solanacearum GMI1000 0.24 RS_RS05405 non-heme iron oxygenase ferredoxin subunit 0.31 RS_RS03390 16S rRNA pseudouridine(516) synthase low > 80
Pseudomonas simiae WCS417 0.24 PS417_11100 MocE 0.25 PS417_07010 pseudouridine synthase low > 88

Not shown: 6 genomes with orthologs for Xcc-8004.2711.1 only; 26 genomes with orthologs for Xcc-8004.4611.1 only