Conservation of cofitness between Xcc-8004.3681.1 and Xcc-8004.4286.1 in Xanthomonas campestris pv. campestris strain 8004

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE 1.0 Xcc-8004.4286.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.40 17
Lysobacter sp. OAE881 0.79 ABIE51_RS13890 RNA polymerase sigma factor RpoE 0.88 ABIE51_RS05295 response regulator transcription factor low > 62
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE 0.73 OKGIIK_10950 ompR DNA-binding response regulator low > 52
Rhodanobacter denitrificans MT42 0.66 LRK55_RS16655 RNA polymerase sigma factor RpoE 0.73 LRK55_RS03860 response regulator transcription factor
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS16940 RNA polymerase sigma factor RpoE 0.73 LRK54_RS04090 response regulator transcription factor low > 59
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE 0.53 B158DRAFT_0632 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 40
Alteromonas macleodii MIT1002 0.57 MIT1002_02719 Sigma-24 0.36 MIT1002_03097 Transcriptional activator protein CopR
Shewanella sp. ANA-3 0.56 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) 0.38 Shewana3_4007 two component transcriptional regulator (RefSeq)
Shewanella oneidensis MR-1 0.55 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) 0.41 SO4623 DNA-binding response regulator (NCBI ptt file)
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS14080 RNA polymerase sigma factor RpoE 0.34 RR42_RS09165 transcriptional regulator low > 128
Shewanella amazonensis SB2B 0.51 Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) 0.40 Sama_0146 response regulator receiver protein (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3339 RNA polymerase sigma factor RpoE 0.33 GFF1102 DNA-binding heavy metal response regulator low > 90
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor 0.32 ABZR88_RS15000 response regulator transcription factor low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS15190 RNA polymerase sigma factor 0.32 CA265_RS04655 DNA-binding response regulator low > 88
Mycobacterium tuberculosis H37Rv 0.22 Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) 0.33 Rv0981 Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein) 0.26 12

Not shown: 71 genomes with orthologs for Xcc-8004.3681.1 only; 3 genomes with orthologs for Xcc-8004.4286.1 only