Conservation of cofitness between SMc00770 and SM_b21631 in Sinorhizobium meliloti 1021

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00770 putrescine-binding periplasmic protein 1.0 SM_b21631 carboxynorspermidine decarboxylase 0.40 15
Agrobacterium fabrum C58 0.61 Atu0609 ABC transporter, substrate binding protein (putrescine) 0.87 Atu4169 carboxynorspermidine decarboxylase — —
Pseudomonas stutzeri RCH2 0.56 Psest_4284 Spermidine/putrescine-binding periplasmic protein 0.75 Psest_1054 Diaminopimelate decarboxylase low > 67
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4514 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.77 Pf6N2E2_1606 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2260 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.76 Pf1N1B4_5137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.31 12
Pseudomonas sp. RS175 0.53 PFR28_04294 Spermidine-binding periplasmic protein SpuE 0.77 PFR28_01527 Carboxynorspermidine/carboxyspermidine decarboxylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_13160 putrescine ABC transporter, substrate-binding component (from data) 0.77 AO356_23420 carboxynorspermidine decarboxylase low > 104
Pseudomonas putida KT2440 0.53 PP_5180 spermidine/putrescine ABC transporter - periplasmic subunit 0.77 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase 0.29 14
Pseudomonas simiae WCS417 0.52 PS417_27120 ABC transporter substrate-binding protein 0.77 PS417_15465 carboxynorspermidine decarboxylase low > 88
Pseudomonas fluorescens SBW25 0.52 PFLU_RS28770 polyamine ABC transporter substrate-binding protein 0.76 PFLU_RS17450 carboxynorspermidine decarboxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS28770 polyamine ABC transporter substrate-binding protein 0.76 PFLU_RS17450 carboxynorspermidine decarboxylase low > 109
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_1957 extracellular solute-binding protein family 1 (RefSeq) 0.34 DvMF_1532 carboxynorspermidine decarboxylase (RefSeq) low > 51
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein 0.51 CSW01_08160 carboxynorspermidine decarboxylase low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU0095 potD-1 polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) 0.34 DVU0419 nspC carboxynorspermidine decarboxylase (TIGR) low > 55
Bacteroides thetaiotaomicron VPI-5482 0.18 BT1288 spermidine/putrescine ABC transporter (NCBI ptt file) 0.31 BT0674 carboxynorspermidine decarboxylase (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS12435 ABC transporter substrate-binding protein 0.31 HMPREF1181_RS16500 carboxynorspermidine decarboxylase low > 56
Bacteroides ovatus ATCC 8483 0.17 BACOVA_00085 ABC transporter, solute-binding protein 0.32 BACOVA_02371 carboxynorspermidine decarboxylase low > 94

Not shown: 53 genomes with orthologs for SMc00770 only; 6 genomes with orthologs for SM_b21631 only