Conservation of cofitness between QEN71_RS23130 and QEN71_RS04380 in Paraburkholderia sabiae LMG 24235

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS23130 LysR family transcriptional regulator 1.0 QEN71_RS04380 MATE family efflux transporter 0.37 19
Burkholderia phytofirmans PsJN 0.88 BPHYT_RS08035 LysR family transcriptional regulator 0.87 BPHYT_RS14600 multidrug transporter MatE low > 109
Paraburkholderia graminis OAS925 0.81 ABIE53_001823 DNA-binding transcriptional LysR family regulator 0.88 ABIE53_003081 MATE family multidrug resistance protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_05098 DNA-binding transcriptional regulator, LysR family 0.88 H281DRAFT_04317 multidrug resistance protein, MATE family low > 103
Serratia liquefaciens MT49 0.52 IAI46_18415 LysR family transcriptional regulator 0.23 IAI46_11210 MATE family efflux transporter low > 86
Klebsiella michiganensis M5al 0.50 BWI76_RS20610 LysR family transcriptional regulator 0.22 BWI76_RS16535 MATE family efflux transporter low > 92
Enterobacter sp. TBS_079 0.49 MPMX20_03302 HTH-type transcriptional regulator CynR 0.22 MPMX20_01973 Multidrug resistance protein MdtK low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF2038 LysR family transcriptional regulator YfeR 0.20 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps low > 78
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0220 Transcriptional regulator 0.21 EX28DRAFT_1660 putative efflux protein, MATE family low > 76
Dickeya dianthicola 67-19 0.48 HGI48_RS00115 LysR family transcriptional regulator 0.24 HGI48_RS12700 MATE family efflux transporter low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS00130 LysR family transcriptional regulator 0.40 DZA65_RS03925 MATE family efflux transporter low > 75
Escherichia coli ECOR27 0.46 NOLOHH_13910 yfeR Uncharacterized HTH-type transcriptional regulator YfeR 0.20 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK low > 75
Escherichia coli ECRC98 0.46 JDDGAC_26180 yfeR Uncharacterized HTH-type transcriptional regulator YfeR 0.20 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK low > 86
Escherichia coli BW25113 0.46 b2409 yfeR predicted DNA-binding transcriptional regulator (NCBI) 0.20 b1663 mdtK multidrug efflux protein NorM (NCBI) low > 76
Escherichia coli ECRC62 0.46 BNILDI_12775 yfeR Uncharacterized HTH-type transcriptional regulator YfeR 0.20 BNILDI_16670 mdtK multidrug efflux MATE transporter MdtK low > 75
Dickeya dadantii 3937 0.46 DDA3937_RS21150 LysR family transcriptional regulator 0.09 DDA3937_RS13595 EmmdR/YeeO family multidrug/toxin efflux MATE transporter low > 74
Escherichia coli ECRC99 0.46 KEDOAH_05990 yfeR Uncharacterized HTH-type transcriptional regulator YfeR 0.20 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK — —
Escherichia coli ECRC101 0.46 MCAODC_12760 yfeR Uncharacterized HTH-type transcriptional regulator YfeR 0.20 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK low > 87
Escherichia coli ECRC100 0.46 OKFHMN_22230 yfeR Uncharacterized HTH-type transcriptional regulator YfeR 0.20 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK low > 80
Escherichia fergusonii Becca 0.46 EFB2_01468 HTH-type transcriptional regulator CynR 0.20 EFB2_02329 Multidrug resistance protein MdtK low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_01315 HTH-type transcriptional regulator CynR 0.20 OHPLBJKB_02061 Multidrug resistance protein MdtK low > 73
Escherichia coli Nissle 1917 0.46 ECOLIN_RS13840 LysR family transcriptional regulator 0.20 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK — —
Escherichia coli BL21 0.46 ECD_02308 transcriptional regulator of yefH 0.20 ECD_01634 multidrug efflux system transporter low > 61
Pantoea sp. MT58 0.46 IAI47_05470 LysR family transcriptional regulator 0.20 IAI47_10820 MATE family efflux transporter low > 76
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17035 LysR family transcriptional regulator 0.24 ABZR86_RS12525 MATE family efflux transporter low > 74
Sinorhizobium meliloti 1021 0.27 SM_b20123 transcriptional regulator 0.25 SMc01211 hypothetical protein low > 103
Phaeobacter inhibens DSM 17395 0.19 PGA1_262p01470 transcriptional regulator, LysR family 0.24 PGA1_c21310 multidrug resistance protein NorM low > 62

Not shown: 12 genomes with orthologs for QEN71_RS23130 only; 47 genomes with orthologs for QEN71_RS04380 only