Conservation of cofitness between Psyr_4909 and Psyr_1963 in Pseudomonas syringae pv. syringae B728a

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.0 Psyr_1963 Cyclic peptide transporter 0.32 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.00 Psyr_1963 Cyclic peptide transporter low > 86
Pseudomonas simiae WCS417 0.89 PS417_01505 gamma-aminobutyrate transporter 0.58 PS417_11705 cyclic peptide transporter low > 88
Pseudomonas fluorescens SBW25 0.89 PFLU_RS01545 GABA permease 0.58 PFLU_RS12450 cyclic peptide export ABC transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS01545 GABA permease 0.58 PFLU_RS12450 cyclic peptide export ABC transporter low > 109
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_375 transport permease protein of gamma-aminobutyrate 0.63 PfGW456L13_2385 PvdE, pyoverdine ABC export system, fused ATPase and permease components low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_4195 transport permease protein of gamma-aminobutyrate 0.61 Pf6N2E2_10 PvdE, pyoverdine ABC export system, fused ATPase and permease components low > 103
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate 0.64 Pf1N1B4_141 PvdE, pyoverdine ABC export system, fused ATPase and permease components low > 87
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_11625 GABA permease 0.63 AO356_21125 cyclic peptide transporter low > 104
Pseudomonas sp. RS175 0.81 PFR28_04595 GABA permease 0.62 PFR28_02877 ABC transporter ATP-binding/permease protein YojI low > 88
Pseudomonas putida KT2440 0.79 PP_0284 gamma-aminobutyrate permease 0.62 PP_4216 pyoverdine ABC export system, fused ATPase and permease components
Pantoea sp. MT58 0.72 IAI47_19470 GABA permease 0.25 IAI47_06535 multidrug ABC transporter permease/ATP-binding protein low > 76
Escherichia coli BL21 0.67 ECD_02519 gamma-aminobutyrate transporter 0.26 ECD_02138 microcin J25 efflux ABC transporter permease/ATPase 0.71 48
Escherichia coli ECRC102 0.67 NIAGMN_18670 gabP GABA permease 0.26 NIAGMN_20985 yojI microcin J25 efflux ABC transporter YojI
Escherichia coli ECRC100 0.67 OKFHMN_20905 gabP GABA permease 0.26 OKFHMN_23220 yojI microcin J25 efflux ABC transporter YojI low > 80
Escherichia coli ECRC101 0.67 MCAODC_11425 gabP GABA permease 0.26 MCAODC_14270 yojI microcin J25 efflux ABC transporter YojI low > 87
Escherichia coli ECRC98 0.67 JDDGAC_24565 gabP GABA permease 0.26 JDDGAC_27180 yojI microcin J25 efflux ABC transporter YojI low > 86
Escherichia coli ECRC99 0.67 KEDOAH_07235 gabP GABA permease 0.26 KEDOAH_04965 yojI microcin J25 efflux ABC transporter YojI
Escherichia coli Nissle 1917 0.67 ECOLIN_RS14850 GABA permease 0.26 ECOLIN_RS12915 microcin J25 efflux ABC transporter YojI
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01069 GABA permease 0.26 OHPLBJKB_01499 ABC transporter ATP-binding/permease protein YojI low > 73
Escherichia coli BW25113 0.67 b2663 gabP gamma-aminobutyrate transporter (NCBI) 0.26 b2211 yojI fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) low > 76
Escherichia coli ECOR38 0.67 HEPCGN_20160 gabP GABA permease 0.26 HEPCGN_22485 yojI microcin J25 efflux ABC transporter YojI low > 87
Escherichia coli ECOR27 0.67 NOLOHH_12730 gabP GABA permease 0.26 NOLOHH_14795 yojI microcin J25 efflux ABC transporter YojI low > 75
Escherichia fergusonii Becca 0.67 EFB2_01267 GABA permease 0.26 EFB2_01644 ABC transporter ATP-binding/permease protein YojI low > 86
Escherichia coli ECRC62 0.67 BNILDI_11290 gabP GABA permease 0.26 BNILDI_13715 yojI microcin J25 efflux ABC transporter YojI low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1568 gamma-aminobutyrate (GABA) permease 0.25 GFF1825 Type I secretion system ATPase, LssB family LapB low > 78
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS31450 amino acid permease 0.28 QEN71_RS15805 cyclic peptide export ABC transporter low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS21680 amino acid permease-associated protein 0.29 BPHYT_RS20255 peptide ABC transporter ATP-binding protein
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family 0.33 H281DRAFT_04928 putative ATP-binding cassette transporter
Ralstonia solanacearum GMI1000 0.29 RS_RS08880 amino acid permease 0.22 RS_RS20175 cyclic peptide export ABC transporter low > 80

Not shown: 9 genomes with orthologs for Psyr_4909 only; 16 genomes with orthologs for Psyr_1963 only