| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4019 | | H-NS family protein MvaT | 1.0 | Psyr_1350 | | site-2 protease, Metallo peptidase, MEROPS family M50B | 0.41 | 14 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4019 | | H-NS family protein MvaT | 1.00 | Psyr_1350 | | site-2 protease, Metallo peptidase, MEROPS family M50B | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_667 | | transcriptional regulator MvaT, P16 subunit | 0.85 | Pf1N1B4_3091 | | Membrane-associated zinc metalloprotease | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_1824 | | transcriptional regulator MvaT, P16 subunit | 0.84 | PfGW456L13_4701 | | Membrane-associated zinc metalloprotease | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_17890 | | H-NS histone | 0.85 | AO356_06005 | | zinc metallopeptidase RseP | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_5507 | | transcriptional regulator MvaT, P16 subunit | 0.85 | Pf6N2E2_3062 | | Membrane-associated zinc metalloprotease | — | — |
| Pseudomonas sp. DMC3 | 0.89 | GFF5214 | | hypothetical protein | 0.87 | GFF2060 | | Regulator of sigma-E protease RseP | low | > 89 |
| Pseudomonas sp. SVBP6 | 0.88 | COO64_RS12210 | mvaT | histone-like nucleoid-structuring protein MvaT | 0.80 | COO64_RS19675 | rseP | RIP metalloprotease RseP | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.88 | AO353_03715 | | H-NS histone | 0.85 | AO353_16495 | | zinc metallopeptidase RseP | 0.27 | 34 |
| Pseudomonas fluorescens SBW25 | 0.88 | PFLU_RS24205 | | DNA binding protein | 0.85 | PFLU_RS06310 | | sigma E protease regulator RseP | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.88 | PFLU_RS24205 | | DNA binding protein | 0.85 | PFLU_RS06310 | | sigma E protease regulator RseP | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.88 | GEMAOFIL_04668 | | hypothetical protein | 0.83 | GEMAOFIL_01419 | | Regulator of sigma-E protease RseP | — | — |
| Pseudomonas sp. RS175 | 0.88 | PFR28_03440 | | hypothetical protein | 0.85 | PFR28_00403 | | Regulator of sigma-E protease RseP | — | — |
| Pseudomonas simiae WCS417 | 0.87 | PS417_22570 | | H-NS histone | 0.84 | PS417_06245 | | zinc metallopeptidase RseP | low | > 88 |
| Pseudomonas segetis P6 | 0.86 | MPMX49_03633 | | hypothetical protein | 0.80 | MPMX49_03455 | | Regulator of sigma-E protease RseP | — | — |
| Pseudomonas sp. BP01 | 0.86 | JOY50_RS14340 | mvaT | histone-like nucleoid-structuring protein MvaT | 0.83 | JOY50_RS26225 | rseP | RIP metalloprotease RseP | low | > 84 |
| Pseudomonas putida KT2440 | 0.85 | PP_1366 | | Transcriptional regulator MvaT, P16 subunit | 0.83 | PP_1598 | | regulatory intramembrane protein RIP zinc protease | low | > 96 |
| Pseudomonas sp. S08-1 | 0.81 | OH686_18290 | | transcriptional regulator MvaT, P16 subunit | 0.77 | OH686_06450 | | RIP metalloprotease RseP | — | — |
| Pseudomonas stutzeri RCH2 | 0.81 | Psest_3179 | | hypothetical protein | 0.79 | Psest_2835 | | RIP metalloprotease RseP | — | — |
| Pseudomonas aeruginosa PA14 | 0.79 | IKLFDK_02530 | | transcriptional regulator MvaT | 0.79 | IKLFDK_18630 | | metalloprotease protease | 0.49 | 77 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_2379 | | transcriptional regulator MvaT, P16 subunit | 0.54 | HP15_1173 | | membrane-associated zinc metalloprotease | — | — |
Not shown: 0 genomes with orthologs for Psyr_4019 only; 76 genomes with orthologs for Psyr_1350 only