| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_2308 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | 1.0 | Pf6N2E2_2597 | | Flagellar regulatory protein FleQ | 0.42 | 15 |
| Pseudomonas fluorescens FW300-N2C3 | 0.95 | AO356_02420 | | cytochrome C oxidase Cbb3 | 1.00 | AO356_03855 | | AAA family ATPase | 0.56 | 16 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_01092 | | Cbb3-type cytochrome c oxidase subunit CcoP1 | 1.00 | PFR28_00828 | | Anaerobic nitric oxide reductase transcription regulator NorR | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_3881 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | 0.98 | Pf1N1B4_3599 | | Flagellar regulatory protein FleQ | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_4059 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | 0.98 | PfGW456L13_4357 | | Flagellar regulatory protein FleQ | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.89 | AO353_00600 | | cytochrome C oxidase Cbb3 | 0.98 | AO353_18660 | | AAA family ATPase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.84 | PFLU_RS22335 | | cytochrome-c oxidase, cbb3-type subunit III | 0.95 | PFLU_RS21795 | | sigma-54-dependent Fis family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.84 | PFLU_RS22335 | | cytochrome-c oxidase, cbb3-type subunit III | 0.95 | PFLU_RS21795 | | sigma-54-dependent Fis family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.83 | PS417_20715 | | cytochrome Cbb3 | 0.96 | PS417_19825 | | ATPase AAA | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_2526 | | cytochrome c oxidase, cbb3-type, subunit III | 0.77 | Psest_1765 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 67 |
| Marinobacter adhaerens HP15 | 0.48 | HP15_2110 | | cytochrome c oxidase, cbb3-type, subunit III | 0.60 | HP15_2330 | | two component, sigma54 specific, transcriptional regulator, Fis family | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS04435 | | cytochrome-c oxidase, cbb3-type subunit III | 0.42 | ABZR86_RS20155 | | sigma-54 dependent transcriptional regulator | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.32 | LRK54_RS17215 | | cytochrome-c oxidase, cbb3-type subunit III | 0.40 | LRK54_RS13485 | | sigma-54-dependent Fis family transcriptional regulator | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.32 | LRK55_RS17440 | | cytochrome-c oxidase, cbb3-type subunit III | 0.40 | LRK55_RS13225 | | sigma-54-dependent Fis family transcriptional regulator | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.32 | OKGIIK_07670 | ccoP | cytochrome-c oxidase, cbb3-type subunit III | 0.39 | OKGIIK_02735 | | Fis family transcriptional regulator | low | > 52 |
Not shown: 16 genomes with orthologs for Pf6N2E2_2308 only; 12 genomes with orthologs for Pf6N2E2_2597 only