Conservation of cofitness between PP_5346 and PP_5348 in Pseudomonas putida KT2440

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5346 pyruvate carboxylase subunit B 1.0 PP_5348 Transcriptional regulator, LysR family 0.94 2
Pseudomonas sp. RS175 0.97 PFR28_04517 Oxaloacetate decarboxylase alpha chain 0.86 PFR28_04519 HTH-type transcriptional activator CmpR 0.92 2
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_729 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.84 PfGW456L13_727 LysR family transcriptional regulator PA5437 0.98 2
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_12025 pyruvate carboxylase subunit B 0.85 AO356_12015 LysR family transcriptional regulator 0.92 2
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_4279 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.83 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 0.95 2
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_10025 pyruvate carboxylase subunit B 0.87 AO353_10035 LysR family transcriptional regulator 0.97 2
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2011 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) 0.85 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 0.95 2
Pseudomonas simiae WCS417 0.95 PS417_28210 pyruvate carboxylase subunit B 0.84 PS417_28220 LysR family transcriptional regulator — —
Pseudomonas fluorescens SBW25 0.95 PFLU_RS29875 oxaloacetate decarboxylase subunit alpha 0.84 PFLU_RS29885 LysR family transcriptional regulator 0.95 2
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS29875 oxaloacetate decarboxylase subunit alpha 0.84 PFLU_RS29885 LysR family transcriptional regulator 0.98 2
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit 0.80 Psyr_5062 transcriptional regulator, LysR family 0.85 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit 0.80 Psyr_5062 transcriptional regulator, LysR family 0.64 8
Pseudomonas sp. S08-1 0.88 OH686_13205 oxaloacetate decarboxylase alpha subunit 0.71 OH686_13195 Transcriptional regulator, LysR family 0.69 11
Pseudomonas stutzeri RCH2 0.86 Psest_4084 oxaloacetate decarboxylase alpha subunit 0.74 Psest_4086 Transcriptional regulator 0.97 2
Shewanella amazonensis SB2B 0.48 Sama_1052 oxaloacetate decarboxylase (RefSeq) 0.24 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.47 Shew_1220 pyruvate carboxylase subunit B (RefSeq) 0.33 Shew_1245 LysR family transcriptional regulator (RefSeq) low > 60
Shewanella sp. ANA-3 0.45 Shewana3_3165 oxaloacetate decarboxylase (RefSeq) 0.22 Shewana3_0835 LysR family transcriptional regulator (RefSeq) low > 73

Not shown: 12 genomes with orthologs for PP_5346 only; 15 genomes with orthologs for PP_5348 only