Conservation of cofitness between PP_4162 and PP_4589 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4162 conserved membrane protein of unknown function 1.0 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.27 12
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS09095 AI-2E family transporter 0.83 PFLU_RS07475 D-2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.81 PFLU_RS09095 AI-2E family transporter 0.83 PFLU_RS07475 D-2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_19830 hypothetical protein 0.85 AO356_04410 hydroxyacid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_5882 Putative membrane protein 0.84 Pf6N2E2_2725 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.26 18
Pseudomonas sp. RS175 0.80 PFR28_03068 Putative transport protein YdiK 0.83 PFR28_00714 Glyoxylate/hydroxypyruvate reductase A low > 88
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_2055 Putative membrane protein 0.86 PfGW456L13_4494 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas simiae WCS417 0.79 PS417_09040 hypothetical protein 0.84 PS417_07385 2-hydroxyacid dehydrogenase low > 88
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2029 Protein of unknown function UPF0118 0.83 Psyr_1565 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2029 Protein of unknown function UPF0118 0.83 Psyr_1565 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_01690 hypothetical protein 0.84 AO353_17865 hydroxyacid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3528 Putative membrane protein 0.86 Pf1N1B4_3347 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas sp. S08-1 0.68 OH686_01920 Uncharacterized UPF0118 membrane protein 0.62 OH686_05305 D-3-phosphoglycerate dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS03900 membrane protein 0.17 RR42_RS27410 hydroxyacid dehydrogenase low > 128
Pectobacterium carotovorum WPP14 0.29 HER17_RS08900 AI-2E family transporter YdiK 0.56 HER17_RS02495 D-2-hydroxyacid dehydrogenase low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS17055 hypothetical protein 0.18 BWI76_RS21910 glyoxylate/hydroxypyruvate reductase A low > 92
Dickeya dadantii 3937 0.28 DDA3937_RS12800 AI-2E family transporter YdiK 0.50 DDA3937_RS18695 D-2-hydroxyacid dehydrogenase low > 74
Enterobacter sp. TBS_079 0.28 MPMX20_01925 Putative transport protein YdiK 0.19 MPMX20_01715 Glyoxylate/hydroxypyruvate reductase A low > 85
Dickeya dianthicola ME23 0.28 DZA65_RS13330 AI-2E family transporter YdiK 0.48 DZA65_RS19760 D-2-hydroxyacid dehydrogenase low > 75
Dickeya dianthicola 67-19 0.28 HGI48_RS12865 AI-2E family transporter YdiK 0.49 HGI48_RS18625 D-2-hydroxyacid dehydrogenase low > 71
Acinetobacter radioresistens SK82 0.28 MPMX26_02768 Putative transport protein YdiK 0.19 MPMX26_01500 Glyoxylate/hydroxypyruvate reductase A — —
Shewanella oneidensis MR-1 0.19 SO0472 membrane protein, putative (NCBI ptt file) 0.29 SO0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF3026 putative membrane protein 0.19 GFF4720 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 90

Not shown: 28 genomes with orthologs for PP_4162 only; 9 genomes with orthologs for PP_4589 only