Conservation of cofitness between PP_2356 and PP_4116 in Pseudomonas putida KT2440

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2356 putative Phytochrome family protein 1.0 PP_4116 isocitrate lyase 0.39 15
Pseudomonas stutzeri RCH2 0.61 Psest_4345 Bacteriophytochrome (light-regulated signal transduction histidine kinase) 0.15 Psest_2014 Isocitrate lyase (EC 4.1.3.1) (from data) low > 67
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS06325 ATPase 0.71 BPHYT_RS12285 isocitrate lyase low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS10565 ATP-binding protein 0.70 QEN71_RS06270 isocitrate lyase low > 153
Azospirillum brasilense Sp245 0.42 AZOBR_RS30860 sensor histidine kinase 0.55 AZOBR_RS02405 isocitrate lyase low > 97
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_01748 Bacteriophytochrome (light-regulated signal transduction histidine kinase) 0.72 H281DRAFT_00580 isocitrate lyase low > 103
Azospirillum sp. SherDot2 0.41 MPMX19_04272 Phytochrome-like protein cph1 0.57 MPMX19_05830 Isocitrate lyase low > 112
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS02225 ATP-binding protein 0.68 ABZR87_RS11590 isocitrate lyase low > 80
Variovorax sp. SCN45 0.39 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) 0.71 GFF4829 Isocitrate lyase (EC 4.1.3.1) low > 127
Agrobacterium fabrum C58 0.39 Atu1990 bacteriophytochrome protein 0.59 Atu0607 isocitrate lyase 0.21 21
Rhodopseudomonas palustris CGA009 0.32 TX73_015620 ATP-binding protein 0.15 TX73_022775 isocitrate lyase — —
Pseudomonas fluorescens SBW25 0.25 PFLU_RS25130 GAF domain-containing protein 0.97 PFLU_RS18610 isocitrate lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS25130 GAF domain-containing protein 0.97 PFLU_RS18610 isocitrate lyase 0.28 102
Pseudomonas simiae WCS417 0.24 PS417_23325 histidine kinase 0.97 PS417_16570 isocitrate lyase low > 88
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_09865 histidine kinase 0.96 AO356_22080 isocitrate lyase low > 104
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_3852 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) 0.96 Pf6N2E2_279 Isocitrate lyase (EC 4.1.3.1) low > 103
Pseudomonas sp. RS175 0.23 PFR28_04918 Phytochrome-like protein cph1 0.96 PFR28_02625 Isocitrate lyase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_05925 hypothetical protein 0.60 CA264_09255 isocitrate lyase low > 74
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS12460 light-regulated signal transduction histidine kinase 0.71 HSERO_RS10565 isocitrate lyase low > 78
Alteromonas macleodii MIT1002 0.18 MIT1002_03619 Phytochrome-like protein cph1 0.15 MIT1002_02831 Isocitrate lyase low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS15480 histidine kinase dimerization/phosphoacceptor domain -containing protein 0.55 A4249_RS02595 isocitrate lyase low > 48

Not shown: 2 genomes with orthologs for PP_2356 only; 59 genomes with orthologs for PP_4116 only