Conservation of cofitness between PP_4210 and PP_3544 in Pseudomonas putida KT2440

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4210 pyoverdine efflux carrier and ATP binding protein 1.0 PP_3544 Transcriptional regulator, GntR family 0.25 17
Pseudomonas simiae WCS417 0.77 PS417_17640 macrolide ABC transporter ATP-binding protein 0.88 PS417_12775 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.77 PFLU_RS19430 MacB family efflux pump subunit 0.88 PFLU_RS13455 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS19430 MacB family efflux pump subunit 0.88 PFLU_RS13455 PLP-dependent aminotransferase family protein low > 109
Pseudomonas sp. RS175 0.76 PFR28_02869 Macrolide export ATP-binding/permease protein MacB 0.87 PFR28_01312 HTH-type transcriptional regulator NorG low > 88
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_2392 Pyoverdine efflux carrier and ATP binding protein 0.90 PfGW456L13_3261 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_21165 macrolide ABC transporter ATP-binding protein 0.89 AO356_01275 GntR family transcriptional regulator low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_1969 ABC transporter:Protein of unknown function DUF214 0.67 Psyr_3087 transcriptional regulator, GntR family low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_1969 ABC transporter:Protein of unknown function DUF214 0.67 Psyr_3087 transcriptional regulator, GntR family low > 86
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_19 Pyoverdine efflux carrier and ATP binding protein 0.89 Pf6N2E2_2127 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_135 Pyoverdine efflux carrier and ATP binding protein 0.90 Pf1N1B4_4672 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS14310 MacB family efflux pump subunit 0.60 RR42_RS10785 GntR family transcriptional regulator low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3902 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) 0.52 GFF4839 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 90
Serratia liquefaciens MT49 0.41 IAI46_08500 macrolide ABC transporter ATP-binding protein/permease MacB 0.50 IAI46_15405 PLP-dependent aminotransferase family protein low > 86
Enterobacter sp. TBS_079 0.41 MPMX20_01541 Macrolide export ATP-binding/permease protein MacB 0.45 MPMX20_02425 HTH-type transcriptional regulator NorG low > 85
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS35165 MacB family efflux pump subunit 0.59 QEN71_RS13030 PLP-dependent aminotransferase family protein low > 153
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2053 ABC-type antimicrobial peptide transport system, ATPase component 0.45 EX28DRAFT_1025 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 76
Variovorax sp. SCN45 0.40 GFF1293 Macrolide export ATP-binding/permease protein MacB 0.52 GFF4125 DNA-binding transcriptional regulator, MocR family / aminotransferase domain low > 127
Shewanella sp. ANA-3 0.40 Shewana3_3455 ABC transporter related (RefSeq) 0.43 Shewana3_0929 GntR family transcriptional regulator (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4904 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) 0.45 GFF2589 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 78
Escherichia fergusonii Becca 0.39 EFB2_03182 Macrolide export ATP-binding/permease protein MacB 0.45 EFB2_02545 2-aminoadipate transaminase low > 86
Escherichia coli ECOR38 0.39 HEPCGN_22880 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 HEPCGN_26230 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 87
Escherichia coli BW25113 0.39 b0879 macB fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) 0.45 b1439 ydcR fused predicted DNA-binding transcriptional regulator/predicted amino transferase (NCBI) low > 76
Escherichia coli ECRC62 0.39 BNILDI_20455 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 BNILDI_17705 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 75
Escherichia coli BL21 0.39 ECD_00884 macrolide ABC transporter peremase/ATPase 0.45 ECD_01396 putative DNA-binding transcriptional regulator and putative aminotransferase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_02789 Macrolide export ATP-binding/permease protein MacB 0.45 OHPLBJKB_02276 2-aminoadipate transaminase low > 73
Escherichia coli ECRC99 0.39 KEDOAH_22105 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 KEDOAH_26860 ydcR Uncharacterized HTH-type transcriptional regulator YdcR
Escherichia coli ECRC98 0.39 JDDGAC_09440 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 JDDGAC_04070 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 86
Escherichia coli ECRC102 0.39 NIAGMN_03845 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 NIAGMN_25715 ydcR Uncharacterized HTH-type transcriptional regulator YdcR
Escherichia coli ECRC100 0.39 OKFHMN_05805 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 OKFHMN_01580 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 80
Escherichia coli ECRC101 0.39 MCAODC_25020 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 MCAODC_16360 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 87
Escherichia coli ECOR27 0.39 NOLOHH_22200 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.45 NOLOHH_19255 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 75
Pectobacterium carotovorum WPP14 0.38 HER17_RS17205 MacB family efflux pump subunit 0.48 HER17_RS07255 PLP-dependent aminotransferase family protein low > 75
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS10240 macrolide ABC transporter ATP-binding protein 0.47 HSERO_RS08395 2-aminoadipate aminotransferase low > 78
Klebsiella michiganensis M5al 0.38 BWI76_RS09600 macrolide ABC transporter permease/ATP-binding protein MacB 0.44 BWI76_RS13400 GntR family transcriptional regulator low > 92
Alteromonas macleodii MIT1002 0.38 MIT1002_00482 Macrolide export ATP-binding/permease protein MacB 0.39 MIT1002_00662 putative HTH-type transcriptional regulator YdcR low > 70
Acinetobacter radioresistens SK82 0.38 MPMX26_00466 Macrolide export ATP-binding/permease protein MacB 0.28 MPMX26_03000 HTH-type transcriptional regulator NorG low > 36
Dickeya dadantii 3937 0.36 DDA3937_RS04445 MacB family efflux pump subunit 0.47 DDA3937_RS14180 PLP-dependent aminotransferase family protein low > 74

Not shown: 7 genomes with orthologs for PP_4210 only; 28 genomes with orthologs for PP_3544 only