Conservation of cofitness between PP_1215 and PP_3248 in Pseudomonas putida KT2440

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1215 Crossover junction endodeoxyribonuclease RuvC 1.0 PP_3248 Dyp-type peroxidase family protein 0.31 13
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_639 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.63 Pf1N1B4_5683 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_03590 crossover junction endodeoxyribonuclease RuvC 0.63 AO353_22685 peroxidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5535 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.58 Pf6N2E2_2129 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_18015 crossover junction endodeoxyribonuclease RuvC 0.56 AO356_01290 peroxidase — —
Pseudomonas sp. RS175 0.87 PFR28_03414 Crossover junction endodeoxyribonuclease RuvC 0.61 PFR28_01310 Dye-decolorizing peroxidase YfeX — —
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1851 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.61 PfGW456L13_2809 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Pseudomonas fluorescens SBW25 0.86 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC 0.60 PFLU_RS18740 Dyp-type peroxidase low > 109
Pseudomonas simiae WCS417 0.86 PS417_22455 crossover junction endodeoxyribonuclease RuvC 0.60 PS417_16730 peroxidase — —
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC 0.60 PFLU_RS18740 Dyp-type peroxidase low > 109
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_09250 crossover junction endodeoxyribonuclease RuvC 0.19 CSW01_10710 deferrochelatase low > 62
Alteromonas macleodii MIT1002 0.51 MIT1002_01331 Crossover junction endodeoxyribonuclease RuvC 0.11 MIT1002_00420 putative deferrochelatase/peroxidase YfeX — —
Enterobacter sp. TBS_079 0.49 MPMX20_02768 Crossover junction endodeoxyribonuclease RuvC 0.17 MPMX20_03318 Dye-decolorizing peroxidase YfeX low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0694 Holliday junction endonuclease RuvC (EC 3.1.22.4) 0.18 EX28DRAFT_0204 Dyp-type peroxidase family — —
Klebsiella michiganensis M5al 0.48 BWI76_RS18155 crossover junction endodeoxyribonuclease RuvC 0.19 BWI76_RS20710 dyp-type peroxidase family protein — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04253 Holliday junction endonuclease RuvC 0.13 H281DRAFT_01004 putative iron-dependent peroxidase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF572 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.45 GFF4790 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_0822 Holliday junction endonuclease RuvC (EC 3.1.22.4) 0.14 Ga0059261_3869 Dyp-type peroxidase family — —

Not shown: 76 genomes with orthologs for PP_1215 only; 0 genomes with orthologs for PP_3248 only