Conservation of cofitness between PP_5114 and PP_1807 in Pseudomonas putida KT2440

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5114 putative adenine methyltransferase 1.0 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase 0.56 13
Pectobacterium carotovorum WPP14 0.48 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase 0.74 HER17_RS10500 3-deoxy-8-phosphooctulonate synthase — —
Rahnella sp. WP5 0.48 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 EX31_RS07295 3-deoxy-8-phosphooctulonate synthase — —
Serratia liquefaciens MT49 0.47 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase 0.75 IAI46_10300 3-deoxy-8-phosphooctulonate synthase — —
Dickeya dianthicola 67-19 0.46 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 HGI48_RS10925 3-deoxy-8-phosphooctulonate synthase — —
Dickeya dadantii 3937 0.46 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase 0.72 DDA3937_RS10975 3-deoxy-8-phosphooctulonate synthase — —
Dickeya dianthicola ME23 0.46 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 DZA65_RS11385 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D 0.73 OHPLBJKB_02472 2-dehydro-3-deoxyphosphooctonate aldolase — —
Escherichia fergusonii Becca 0.43 EFB2_00351 Ribosomal RNA small subunit methyltransferase D 0.73 EFB2_02712 2-dehydro-3-deoxyphosphooctonate aldolase — —
Escherichia coli ECOR38 0.43 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 HEPCGN_24935 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli ECRC62 0.43 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 BNILDI_18745 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 ECOLIN_RS07340 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli ECOR27 0.43 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 NOLOHH_20590 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.74 CSW01_10825 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli BW25113 0.43 b3465 yhhF predicted methyltransferase (NCBI) 0.73 b1215 kdsA 2-dehydro-3-deoxyphosphooctonate aldolase (NCBI) — —
Escherichia coli ECRC99 0.43 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 KEDOAH_25465 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli ECRC98 0.43 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 JDDGAC_06105 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli ECRC102 0.43 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 NIAGMN_27765 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli ECRC101 0.43 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 OKFHMN_28470 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli ECRC101 0.43 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.73 MCAODC_21790 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Escherichia coli BL21 0.43 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent 0.73 ECD_01190 3-deoxy-D-manno-octulosonate 8-phosphate synthase — —
Pantoea sp. MT58 0.42 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase 0.74 IAI47_11250 3-deoxy-8-phosphooctulonate synthase — —
Erwinia tracheiphila SCR3 0.41 LU632_RS19285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.72 LU632_RS10750 kdsA 3-deoxy-8-phosphooctulonate synthase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase 0.74 BWI76_RS17415 3-deoxy-8-phosphooctulonate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) 0.73 GFF2770 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) — —
Enterobacter asburiae PDN3 0.39 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.73 EX28DRAFT_0834 3-deoxy-8-phosphooctulonate synthase — —
Enterobacter sp. TBS_079 0.38 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D 0.73 MPMX20_02632 2-dehydro-3-deoxyphosphooctonate aldolase — —
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) 0.45 B158DRAFT_2282 3-deoxy-8-phosphooctulonate synthase — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS02815 methyltransferase 0.71 BPHYT_RS31025 2-dehydro-3-deoxyphosphooctonate aldolase — —
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS20695 methyltransferase 0.45 HSERO_RS13915 2-dehydro-3-deoxyphosphooctonate aldolase — —
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.42 Ac3H11_289 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) — —
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1480 hypothetical protein 0.46 Synpcc7942_2289 ccmA 2-dehydro-3-deoxyphosphooctonate aldolase — —

Not shown: 54 genomes with orthologs for PP_5114 only; 2 genomes with orthologs for PP_1807 only