Conservation of cofitness between PP_2078 and PP_1469 in Pseudomonas putida KT2440

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2078 transcriptional activator protein LysR 1.0 PP_1469 Thiol:disulfide interchange protein DsbC 0.16 16
Escherichia coli ECOR38 0.52 HEPCGN_19570 lysR DNA-binding transcriptional regulator LysR 0.31 HEPCGN_18865 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 85
Escherichia coli ECRC62 0.51 BNILDI_10305 lysR DNA-binding transcriptional regulator LysR 0.31 BNILDI_10030 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC — —
Escherichia coli ECOR27 0.51 NOLOHH_11825 lysR DNA-binding transcriptional regulator LysR 0.31 NOLOHH_11500 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 57
Rahnella sp. WP5 0.51 EX31_RS13280 LysR family transcriptional regulator 0.33 EX31_RS13475 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 89
Escherichia coli ECRC98 0.51 JDDGAC_23605 lysR DNA-binding transcriptional regulator LysR 0.31 JDDGAC_23215 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC — —
Escherichia coli ECRC101 0.51 MCAODC_10465 lysR DNA-binding transcriptional regulator LysR 0.31 MCAODC_10095 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC — —
Escherichia coli ECRC99 0.51 KEDOAH_08190 lysR DNA-binding transcriptional regulator LysR 0.31 KEDOAH_08565 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC — —
Erwinia tracheiphila SCR3 0.51 LU632_RS06035 LysR family transcriptional regulator 0.30 LU632_RS05980 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 74
Escherichia coli ECRC101 0.51 OKFHMN_19940 lysR DNA-binding transcriptional regulator LysR 0.31 OKFHMN_19575 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC — —
Escherichia coli ECRC102 0.51 NIAGMN_17710 lysR DNA-binding transcriptional regulator LysR 0.31 NIAGMN_17340 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC — —
Escherichia coli BL21 0.51 ECD_02687 transcriptional activator of lysA; autorepressor 0.31 ECD_02725 protein disulfide isomerase II low > 60
Escherichia coli BW25113 0.51 b2839 lysR DNA-binding transcriptional dual regulator (NCBI) 0.31 b2893 dsbC protein disulfide isomerase II (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00890 Octopine catabolism/uptake operon regulatory protein OccR 0.31 OHPLBJKB_00822 Thiol:disulfide interchange protein DsbC low > 73
Serratia liquefaciens MT49 0.50 IAI46_20525 LysR family transcriptional regulator 0.33 IAI46_20725 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 86
Pantoea sp. MT58 0.50 IAI47_03855 LysR family transcriptional regulator 0.30 IAI47_03825 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 76
Dickeya dianthicola 67-19 0.50 HGI48_RS17490 LysR family transcriptional regulator 0.32 HGI48_RS03445 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 71
Dickeya dianthicola ME23 0.50 DZA65_RS18555 LysR family transcriptional regulator 0.32 DZA65_RS03490 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 75
Pectobacterium carotovorum WPP14 0.50 HER17_RS03705 LysR family transcriptional regulator 0.32 HER17_RS17885 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.82 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1324 Transcriptional activator protein LysR 0.32 GFF2990 Thiol:disulfide interchange protein DsbC low > 78
Enterobacter sp. TBS_079 0.49 MPMX20_03706 Octopine catabolism/uptake operon regulatory protein OccR 0.32 MPMX20_03752 Thiol:disulfide interchange protein DsbC low > 85
Dickeya dadantii 3937 0.49 DDA3937_RS17430 LysR family transcriptional regulator 0.32 DDA3937_RS03305 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 74
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS35085 transcriptional regulator 0.19 BPHYT_RS17430 thiol:disulfide interchange protein 0.26 17
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2917 Transcriptional regulator 0.31 EX28DRAFT_2944 Protein-disulfide isomerase low > 76
Klebsiella michiganensis M5al 0.47 BWI76_RS23365 LysR family transcriptional regulator 0.32 BWI76_RS23810 bifunctional protein-disulfide isomerase/oxidoreductase DsbC low > 92
Acidovorax sp. GW101-3H11 0.40 Ac3H11_3863 Transcriptional activator protein LysR 0.17 Ac3H11_4004 Thiol:disulfide interchange protein DsbC low > 79
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS33285 LysR substrate-binding domain-containing protein 0.19 QEN71_RS27590 DsbC family protein low > 153
Variovorax sp. OAS795 0.25 ABID97_RS25700 LysR substrate-binding domain-containing protein 0.17 ABID97_RS24795 DsbC family protein low > 91
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_2536 transcriptional regulator, LysR family 0.75 Psyr_1289 Glutaredoxin — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_2536 transcriptional regulator, LysR family 0.75 Psyr_1289 Glutaredoxin — —
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_08070 LysR family transcriptional regulator 0.73 AO353_04360 protein-disulfide isomerase low > 101
Pseudomonas stutzeri RCH2 0.19 Psest_2120 Transcriptional regulator 0.57 Psest_3128 Protein-disulfide isomerase low > 67
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS07860 LysR family transcriptional regulator 0.17 HSERO_RS20955 thiol:disulfide interchange protein low > 78

Not shown: 6 genomes with orthologs for PP_2078 only; 25 genomes with orthologs for PP_1469 only