Conservation of cofitness between PP_5031 and PP_1302 in Pseudomonas putida KT2440

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5031 proline (histidine) APC transporter 1.0 PP_1302 putative metal-binding hydrolase-oxidase enzyme 0.15 7
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS01810 amino acid permease 0.90 PFLU_RS03760 Nif3-like dinuclear metal center hexameric protein low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS01810 amino acid permease 0.90 PFLU_RS03760 Nif3-like dinuclear metal center hexameric protein low > 109
Pseudomonas simiae WCS417 0.87 PS417_01755 proline-specific permease 0.90 PS417_03710 metal-binding protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4834 histidine:proton symporter, AAT family 0.88 Psyr_4129 Protein of unknown function DUF34 low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4834 histidine:proton symporter, AAT family 0.88 Psyr_4129 Protein of unknown function DUF34 low > 86
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_318 Histidine transport protein (permease) 0.88 PfGW456L13_4997 FIG137478: Hypothetical protein YbgI low > 87
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_12275 histidine permease (from data) 0.89 AO353_05085 metal-binding protein low > 101
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS14635 proline-specific permease 0.50 RR42_RS18835 Nif3-like dinuclear metal center hexameric protein low > 128
Serratia liquefaciens MT49 0.73 IAI46_03655 amino acid permease 0.53 IAI46_06210 type 2 GTP cyclohydrolase I low > 86
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS09765 amino acid permease 0.54 ABZR87_RS02395 Nif3-like dinuclear metal center hexameric protein low > 80
Klebsiella michiganensis M5al 0.64 BWI76_RS08745 proline-specific permease 0.51 BWI76_RS08345 Nif3-like dinuclear metal center protein low > 92
Pantoea sp. MT58 0.63 IAI47_14830 proline-specific permease ProY 0.53 IAI47_13810 type 2 GTP cyclohydrolase I low > 76
Dickeya dianthicola ME23 0.63 DZA65_RS05835 proline-specific permease ProY 0.46 DZA65_RS06800 type 2 GTP cyclohydrolase I low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS05510 proline-specific permease ProY 0.46 HGI48_RS06455 type 2 GTP cyclohydrolase I low > 71
Rahnella sp. WP5 0.62 EX31_RS22070 proline-specific permease ProY 0.48 EX31_RS23375 type 2 GTP cyclohydrolase I low > 89
Pectobacterium carotovorum WPP14 0.60 HER17_RS16015 proline-specific permease ProY 0.53 HER17_RS14990 type 2 GTP cyclohydrolase I low > 75
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.51 EX28DRAFT_2277 dinuclear metal center protein, YbgI/SA1388 family low > 76
Dickeya dadantii 3937 0.59 DDA3937_RS05450 proline-specific permease ProY 0.50 DDA3937_RS06410 type 2 GTP cyclohydrolase I low > 74
Enterobacter sp. TBS_079 0.59 MPMX20_00989 Proline-specific permease ProY 0.51 MPMX20_01344 GTP cyclohydrolase 1 type 2 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4300 Proline-specific permease proY 0.52 GFF4615 FIG137478: Hypothetical protein YbgI low > 78
Escherichia coli ECOR38 0.57 HEPCGN_07170 proY proline-specific permease ProY 0.51 HEPCGN_01200 ybgI radiation resistance protein YbgI low > 87
Escherichia coli ECRC102 0.57 NIAGMN_06585 proY proline-specific permease ProY 0.51 NIAGMN_05065 ybgI radiation resistance protein YbgI — —
Escherichia coli ECRC101 0.57 MCAODC_27755 proY proline-specific permease ProY 0.51 MCAODC_26230 ybgI radiation resistance protein YbgI low > 87
Escherichia coli ECRC62 0.57 BNILDI_22875 proY proline-specific permease ProY 0.51 BNILDI_21390 ybgI radiation resistance protein YbgI low > 75
Escherichia coli BL21 0.57 ECD_00350 proline-specific permease 0.51 ECD_00670 NIF3 family metal-binding protein low > 61
Escherichia coli BW25113 0.57 b0402 proY predicted cryptic proline transporter (NCBI) 0.51 b0710 ybgI conserved metal-binding protein (NCBI) low > 76
Escherichia coli ECRC99 0.57 KEDOAH_19435 proY proline-specific permease ProY 0.51 KEDOAH_20955 ybgI radiation resistance protein YbgI — —
Escherichia coli ECRC98 0.57 JDDGAC_12185 proY proline-specific permease ProY 0.51 JDDGAC_10665 ybgI radiation resistance protein YbgI low > 86
Escherichia fergusonii Becca 0.57 EFB2_03655 Proline-specific permease ProY 0.51 EFB2_03393 GTP cyclohydrolase 1 type 2 low > 86
Escherichia coli ECRC100 0.57 OKFHMN_08530 proY proline-specific permease ProY 0.51 OKFHMN_07010 ybgI radiation resistance protein YbgI low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03274 Proline-specific permease ProY 0.51 OHPLBJKB_03007 GTP cyclohydrolase 1 type 2 low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02425 proline-specific permease ProY 0.51 ECOLIN_RS03800 radiation resistance protein YbgI low > 55
Escherichia coli ECOR27 0.57 NOLOHH_01460 proY proline-specific permease ProY 0.51 NOLOHH_23395 ybgI radiation resistance protein YbgI low > 75
Erwinia tracheiphila SCR3 0.54 LU632_RS18885 proY proline-specific permease ProY 0.51 LU632_RS16150 type 2 GTP cyclohydrolase I low > 74

Not shown: 2 genomes with orthologs for PP_5031 only; 28 genomes with orthologs for PP_1302 only