Conservation of cofitness between PP_1155 and PP_1156 in Pseudomonas putida KT2440

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1155 YaiC/YhcK/ArdA family protein 1.0 PP_1156 putative inner membrane protein 0.21 2
Pseudomonas simiae WCS417 0.64 PS417_21835 histidine kinase 0.70 PS417_26490 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.62 PFLU_RS23435 diguanylate cyclase 0.70 PFLU_RS28145 formate transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS23435 diguanylate cyclase 0.70 PFLU_RS28145 formate transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_01080 histidine kinase 0.69 AO356_13620 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_139 Two-component response regulator 0.70 Pf6N2E2_4642 Putative transport low > 103
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_5860 Two-component response regulator 0.70 Pf1N1B4_2387 Putative transport low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_3763 GGDEF domain protein 0.67 Psyr_3126 transporter, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_3763 GGDEF domain protein 0.67 Psyr_3126 transporter, putative low > 86
Serratia liquefaciens MT49 0.44 IAI46_05890 diguanylate cyclase 0.53 IAI46_18115 formate/nitrite transporter family protein low > 86
Pectobacterium carotovorum WPP14 0.38 HER17_RS14460 diguanylate cyclase AdrA 0.44 HER17_RS06850 formate/nitrite transporter family protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF4282 Protein YaiC 0.51 GFF1959 putative transport low > 78
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS14650 diguanylate cyclase 0.35 QEN71_RS07465 formate/nitrite transporter family protein — —
Escherichia coli ECOR27 0.37 NOLOHH_01540 adrA diguanylate cyclase AdrA 0.50 NOLOHH_14165 yfdC Inner membrane protein YfdC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03289 putative diguanylate cyclase DgcC 0.50 OHPLBJKB_01359 Inner membrane protein YfdC low > 73
Escherichia coli Nissle 1917 0.37 ECOLIN_RS02340 diguanylate cyclase AdrA 0.50 ECOLIN_RS13575 formate/nitrite transporter family protein low > 55
Escherichia coli ECRC102 0.37 NIAGMN_06670 adrA diguanylate cyclase AdrA 0.50 NIAGMN_20305 yfdC Inner membrane protein YfdC — —
Escherichia coli ECRC98 0.37 JDDGAC_12270 adrA diguanylate cyclase AdrA 0.50 JDDGAC_26490 yfdC Inner membrane protein YfdC low > 86
Escherichia coli ECRC99 0.37 KEDOAH_19350 adrA diguanylate cyclase AdrA 0.50 KEDOAH_05665 yfdC Inner membrane protein YfdC — —
Escherichia coli BW25113 0.37 b0385 yaiC predicted diguanylate cyclase (NCBI) 0.50 b2347 yfdC predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC101 0.37 MCAODC_27840 adrA diguanylate cyclase AdrA 0.50 MCAODC_13560 yfdC Inner membrane protein YfdC low > 87
Escherichia coli ECRC100 0.37 OKFHMN_08615 adrA diguanylate cyclase AdrA 0.50 OKFHMN_22530 yfdC Inner membrane protein YfdC low > 80
Escherichia coli ECRC62 0.37 BNILDI_22955 adrA diguanylate cyclase AdrA 0.50 BNILDI_13075 yfdC Inner membrane protein YfdC low > 75
Escherichia coli ECOR38 0.37 HEPCGN_07255 adrA diguanylate cyclase AdrA 0.50 HEPCGN_21725 yfdC Inner membrane protein YfdC low > 87
Escherichia coli BL21 0.37 ECD_00332 diguanylate cyclase, cellulose regualtor 0.50 ECD_02273 putative inner membrane protein low > 61
Escherichia fergusonii Becca 0.37 EFB2_03671 putative diguanylate cyclase DgcC 0.50 EFB2_01513 Inner membrane protein YfdC low > 86
Enterobacter sp. TBS_079 0.35 MPMX20_00975 putative diguanylate cyclase DgcC 0.50 MPMX20_03273 Inner membrane protein YfdC low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2586 diguanylate cyclase (GGDEF) domain 0.50 EX28DRAFT_0266 Formate/nitrite family of transporters low > 76
Pantoea sp. MT58 0.27 IAI47_19665 diguanylate cyclase 0.49 IAI47_06060 formate/nitrite transporter family protein low > 76
Rahnella sp. WP5 0.24 EX31_RS22990 diguanylate cyclase 0.49 EX31_RS19775 formate/nitrite transporter family protein low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS21800 MASE2 domain/diguanylate cyclase 0.50 BWI76_RS20480 formate/nitrite transporter low > 92

Not shown: 8 genomes with orthologs for PP_1155 only; 10 genomes with orthologs for PP_1156 only