Conservation of cofitness between PP_4734 and PP_1014 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate 1.0 PP_1014 aldose-ketose isomerase 0.25 4
Pseudomonas fluorescens SBW25 0.87 PFLU_RS25940 FCD domain-containing protein 0.58 PFLU_RS23765 AGE family epimerase/isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS25940 FCD domain-containing protein 0.58 PFLU_RS23765 AGE family epimerase/isomerase low > 109
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_07545 transcriptional regulator PdhR 0.59 AO356_05200 D-mannose isomerase (EC 5.3.1.7) (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1185 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.56 Pf1N1B4_597 D-mannose isomerase (EC 5.3.1.7) (from data) low > 87
Pseudomonas sp. RS175 0.86 PFR28_00064 Pyruvate dehydrogenase complex repressor 0.58 PFR28_00565 Sulfoquinovose isomerase low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3379 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.58 Pf6N2E2_2894 N-acylglucosamine 2-epimerase (EC 5.1.3.8) low > 103
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_5113 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.58 PfGW456L13_1893 N-acylglucosamine 2-epimerase (EC 5.1.3.8) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05695 transcriptional regulator PdhR 0.61 AO353_03400 D-mannose isomerase (EC 5.3.1.7) (from data) low > 101
Pseudomonas simiae WCS417 0.84 PS417_24100 transcriptional regulator PdhR 0.59 PS417_22150 D-mannose isomerase (EC 5.3.1.7) (from data) low > 88
Enterobacter asburiae PDN3 0.40 EX28DRAFT_3708 Transcriptional regulators 0.42 EX28DRAFT_4358 N-acyl-D-glucosamine 2-epimerase low > 76
Enterobacter sp. TBS_079 0.40 MPMX20_00806 Pyruvate dehydrogenase complex repressor 0.42 MPMX20_04589 Sulfoquinovose isomerase low > 85
Escherichia coli ECOR27 0.40 NOLOHH_02855 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 NOLOHH_06170 yihS sulfoquinovose isomerase low > 57
Escherichia coli ECRC101 0.40 OKFHMN_10510 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 OKFHMN_14035 yihS sulfoquinovose isomerase — —
Escherichia coli ECRC99 0.40 KEDOAH_17645 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 KEDOAH_14120 yihS sulfoquinovose isomerase — —
Escherichia coli BW25113 0.40 b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) 0.41 b3880 yihS orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.40 ECD_00112 pyruvate dehydrogenase complex repressor; autorepressor 0.41 ECD_03765 sulfoquinovose isomerase low > 60
Escherichia coli ECRC62 0.40 BNILDI_08755 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 BNILDI_05360 yihS sulfoquinovose isomerase — —
Escherichia coli ECRC101 0.40 MCAODC_01025 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 MCAODC_04535 yihS sulfoquinovose isomerase — —
Escherichia coli ECOR38 0.40 HEPCGN_08490 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.37 HEPCGN_12670 yihS sulfoquinovose isomerase low > 85
Escherichia coli ECRC98 0.40 JDDGAC_14105 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 JDDGAC_17660 yihS sulfoquinovose isomerase — —
Escherichia coli ECRC102 0.40 NIAGMN_08360 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.41 NIAGMN_11790 yihS sulfoquinovose isomerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF123 Transcriptional repressor for pyruvate dehydrogenase complex 0.41 GFF2235 Aldose-ketose isomerase YihS low > 78
Rahnella sp. WP5 0.38 EX31_RS03485 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.40 EX31_RS11935 sulfoquinovose isomerase low > 89
Phaeobacter inhibens DSM 17395 0.34 PGA1_c00760 putative pyruvate dehydrogenase complex repressor 0.27 PGA1_c16670 D-mannose isomerase (EC 5.3.1.7) (from data) low > 62
Agrobacterium fabrum C58 0.32 Atu0662 transcriptional regulator, GntR family 0.32 Atu2156 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.31 SMc00829 transcriptional regulator 0.18 SMa0058 N-acylglucosamine 2-epimerase low > 103
Rhizobium sp. OAE497 0.18 ABIE40_RS25825 FadR/GntR family transcriptional regulator 0.30 ABIE40_RS12140 AGE family epimerase/isomerase low > 107
Bifidobacterium breve UCC2003 0.13 BBR_RS11160 FadR family transcriptional regulator 0.34 BBR_RS16325 AGE family epimerase/isomerase low > 34

Not shown: 38 genomes with orthologs for PP_4734 only; 8 genomes with orthologs for PP_1014 only