Conservation of cofitness between PP_2929 and PP_0266 in Pseudomonas putida KT2440

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase 1.0 PP_0266 Agmatine deiminase 0.35 19
Pseudomonas sp. RS175 0.94 PFR28_01527 Carboxynorspermidine/carboxyspermidine decarboxylase 0.86 PFR28_04897 Agmatine deiminase low > 88
Pseudomonas simiae WCS417 0.94 PS417_15465 carboxynorspermidine decarboxylase 0.85 PS417_01340 agmatine deiminase 0.19 30
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_5137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.84 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) low > 87
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS17450 carboxynorspermidine decarboxylase 0.85 PFLU_RS01435 agmatine deiminase 0.34 22
Pseudomonas fluorescens SBW25 0.93 PFLU_RS17450 carboxynorspermidine decarboxylase 0.85 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_1606 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.86 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_23420 carboxynorspermidine decarboxylase 0.87 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) low > 104
Pseudomonas stutzeri RCH2 0.90 Psest_1054 Diaminopimelate decarboxylase 0.77 Psest_4291 agmatine deiminase low > 67
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_1532 carboxynorspermidine decarboxylase (RefSeq) 0.31 DvMF_0652 Agmatine deiminase (RefSeq) 0.37 15
Alteromonas macleodii MIT1002 0.33 MIT1002_03110 Carboxynorspermidine/carboxyspermidine decarboxylase 0.15 MIT1002_03760 Putative agmatine deiminase low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS14840 carboxynorspermidine decarboxylase 0.24 A4249_RS11140 agmatine deiminase family protein — —
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS03310 carboxynorspermidine decarboxylase 0.19 HMPREF1058_RS04370 agmatine deiminase family protein 0.46 7
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS01805 carboxynorspermidine decarboxylase 0.23 HMPREF1078_RS01165 agmatine deiminase family protein 0.80 3
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS17730 carboxynorspermidine decarboxylase 0.19 ABI39_RS16700 agmatine deiminase family protein low > 72
Bacteroides ovatus ATCC 8483 0.29 BACOVA_02371 carboxynorspermidine decarboxylase 0.22 BACOVA_02593 hypothetical protein 0.34 69
Bacteroides thetaiotaomicron VPI-5482 0.28 BT0674 carboxynorspermidine decarboxylase (NCBI ptt file) 0.20 BT0876 conserved hypothetical protein (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS16500 carboxynorspermidine decarboxylase 0.25 HMPREF1181_RS14245 agmatine deiminase family protein 0.59 18
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_0330 carboxynorspermidine decarboxylase (EC 4.1.1.-) 0.21 Ga0059261_1981 Peptidylarginine deiminase and related enzymes — —

Not shown: 4 genomes with orthologs for PP_2929 only; 31 genomes with orthologs for PP_0266 only