Conservation of cofitness between PP_0356 and PP_0248 in Pseudomonas putida KT2440

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0356 malate synthase G 1.0 PP_0248 Probable alpha-L-glutamate ligase 0.55 5
Pseudomonas sp. S08-1 0.88 OH686_10405 malate synthase G 0.93 OH686_11080 Ribosomal protein S6--L-glutamate ligase 0.68 19
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07560 malate synthase G 0.95 AO353_11755 ribosomal protein S6 modification protein low > 101
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) 0.96 PfGW456L13_425 Ribosomal protein S6 glutaminyl transferase low > 87
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2478 Malate synthase G (EC 2.3.3.9) 0.96 Pf1N1B4_1774 Ribosomal protein S6 glutaminyl transferase low > 87
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) 0.96 Pf6N2E2_3903 Ribosomal protein S6 glutaminyl transferase low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_14100 malate synthase G 0.96 AO356_10160 ribosomal protein S6 modification protein low > 104
Pseudomonas sp. RS175 0.86 PFR28_04110 Malate synthase G 0.96 PFR28_04870 Ribosomal protein S6--L-glutamate ligase low > 88
Pseudomonas simiae WCS417 0.86 PS417_26040 malate synthase 0.96 PS417_01180 ribosomal protein S6 modification protein low > 88
Pseudomonas fluorescens SBW25 0.85 PFLU_RS27685 malate synthase G 0.96 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase 0.59 54
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS27685 malate synthase G 0.96 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase low > 109
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4700 malate synthase 0.95 Psyr_0173 SSU ribosomal protein S6P modification protein 0.52 17
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4700 malate synthase 0.95 Psyr_0173 SSU ribosomal protein S6P modification protein low > 86
Pseudomonas stutzeri RCH2 0.84 Psest_0354 Malate synthase G (EC 2.3.3.9) (from data) 0.93 Psest_3993 alpha-L-glutamate ligases, RimK family low > 67
Marinobacter adhaerens HP15 0.70 HP15_2188 malate synthase G 0.77 HP15_719 alpha-L-glutamate ligase, RimK family low > 73
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS31820 malate synthase G 0.13 QEN71_RS34085 RimK family alpha-L-glutamate ligase
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00963 malate synthase 0.14 H281DRAFT_01302 SSU ribosomal protein S6P modification protein low > 103
Variovorax sp. OAS795 0.65 ABID97_RS04710 malate synthase G 0.11 ABID97_RS12585 RimK family alpha-L-glutamate ligase
Alteromonas macleodii MIT1002 0.61 MIT1002_02833 Malate synthase G 0.74 MIT1002_03511 Alpha-aminoadipate--LysW ligase LysX low > 70
Escherichia coli BL21 0.60 ECD_02844 malate synthase G 0.66 ECD_00857 ribosomal protein S6 modification protein low > 60
Escherichia coli BW25113 0.60 b2976 glcB malate synthase (NCBI) 0.66 b0852 rimK ribosomal protein S6 modification protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00731 Malate synthase G 0.66 OHPLBJKB_02816 Ribosomal protein S6--L-glutamate ligase low > 73
Escherichia coli ECOR38 0.60 HEPCGN_18015 glcB malate synthase G 0.66 HEPCGN_02060 rimK 30S ribosomal protein S6--L-glutamate ligase low > 85
Escherichia coli ECOR27 0.60 NOLOHH_10940 glcB malate synthase G 0.66 NOLOHH_22340 rimK 30S ribosomal protein S6--L-glutamate ligase low > 57
Escherichia coli Nissle 1917 0.59 ECOLIN_RS17120 malate synthase G 0.66 ECOLIN_RS04535 30S ribosomal protein S6--L-glutamate ligase low > 52
Escherichia coli ECRC62 0.59 BNILDI_00575 glcB malate synthase G 0.66 BNILDI_20595 rimK 30S ribosomal protein S6--L-glutamate ligase
Escherichia fergusonii Becca 0.59 EFB2_00839 Malate synthase G 0.66 EFB2_03209 Ribosomal protein S6--L-glutamate ligase low > 86

Not shown: 19 genomes with orthologs for PP_0356 only; 30 genomes with orthologs for PP_0248 only