Conservation of cofitness between PP_5337 and PP_0137 in Pseudomonas putida KT2440

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5337 LysR family transcriptional regulator 1.0 PP_0137 glutamate/aspartate-proton DAACS transporter 0.53 2
Pseudomonas fluorescens SBW25 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.87 PFLU_RS00460 glutamate/aspartate:proton symporter GltP 0.99 1
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.87 PFLU_RS00460 glutamate/aspartate:proton symporter GltP 0.95 1
Pseudomonas simiae WCS417 0.91 PS417_28125 LysR family transcriptional regulator 0.87 PS417_00470 glutamate:protein symporter — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_09945 LysR family transcriptional regulator 0.86 AO353_10990 glutamate:protein symporter 0.70 1
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_743 Transcriptional regulator 0.86 PfGW456L13_578 Glutamate-aspartate carrier protein 0.66 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_5050 transcriptional regulator, LysR family 0.87 Psyr_0174 Sodium:dicarboxylate symporter low > 86
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_2026 Transcriptional regulator 0.84 Pf1N1B4_1888 Glutamate-aspartate carrier protein 0.57 1
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_5050 transcriptional regulator, LysR family 0.87 Psyr_0174 Sodium:dicarboxylate symporter low > 86
Pseudomonas sp. RS175 0.90 PFR28_04497 HTH-type transcriptional regulator YjiE 0.85 PFR28_04638 Proton/glutamate-aspartate symporter 0.62 3
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_11085 LysR family transcriptional regulator 0.85 AO356_11400 glutamate:protein symporter 0.48 4
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_4084 Transcriptional regulator 0.85 Pf6N2E2_4148 Glutamate-aspartate carrier protein 0.74 1
Pseudomonas stutzeri RCH2 0.80 Psest_4073 Transcriptional regulator 0.30 Psest_4075 symporter for L-glutamate, L-glutamine, and L-proline (from data) — —
Dickeya dianthicola ME23 0.31 DZA65_RS07765 hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 DZA65_RS07875 glutamate/aspartate:proton symporter GltP low > 75
Escherichia coli Nissle 1917 0.31 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 ECOLIN_RS23590 glutamate/aspartate:proton symporter GltP low > 52
Escherichia coli ECOR27 0.31 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 NOLOHH_05035 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli BW25113 0.31 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) 0.71 b4077 gltP glutamate/aspartate:proton symporter (NCBI) low > 76
Escherichia coli ECRC62 0.31 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 BNILDI_06490 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli ECOR38 0.31 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 HEPCGN_11410 gltP glutamate/aspartate:proton symporter GltP low > 85
Escherichia coli BL21 0.31 ECD_04196 hypochlorite-responsive transcription factor 0.71 ECD_03949 glutamate/aspartate:proton symporter low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE 0.71 OHPLBJKB_03963 Proton/glutamate-aspartate symporter low > 73
Escherichia fergusonii Becca 0.31 EFB2_04117 HTH-type transcriptional regulator YjiE 0.71 EFB2_04512 Proton/glutamate-aspartate symporter low > 86
Dickeya dianthicola 67-19 0.31 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 HGI48_RS07365 glutamate/aspartate:proton symporter GltP low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF984 LysR family transcriptional regulator QseA 0.72 GFF1460 Glutamate-aspartate carrier protein low > 78
Dickeya dadantii 3937 0.30 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT 0.71 DDA3937_RS07490 glutamate/aspartate:proton symporter GltP low > 74
Pectobacterium carotovorum WPP14 0.29 HER17_RS14225 hypochlorite stress DNA-binding transcriptional regulator HypT 0.72 HER17_RS14145 glutamate/aspartate:proton symporter GltP low > 75
Klebsiella michiganensis M5al 0.28 BWI76_RS17610 LysR family transcriptional regulator 0.70 BWI76_RS02105 glutamate/aspartate:proton symporter GltP low > 92
Marinobacter adhaerens HP15 0.26 HP15_205 protein containing bacterial regulatory protein, LysR domain 0.26 HP15_2676 proton/sodium-glutamate symport protein low > 73

Not shown: 25 genomes with orthologs for PP_5337 only; 24 genomes with orthologs for PP_0137 only