Conservation of cofitness between PFLU_RS15475 and PFLU_RS29785 in Pseudomonas fluorescens SBW25

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.0 PFLU_RS29785 D-hexose-6-phosphate mutarotase 0.72 6
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.00 PFLU_RS29785 D-hexose-6-phosphate mutarotase 0.22 55
Variovorax sp. OAS795 0.59 ABID97_RS26150 TetR/AcrR family transcriptional regulator 0.17 ABID97_RS23110 D-hexose-6-phosphate mutarotase low > 91
Serratia liquefaciens MT49 0.32 IAI46_07070 TetR/AcrR family transcriptional regulator 0.25 IAI46_14360 D-hexose-6-phosphate mutarotase low > 86
Dickeya dianthicola 67-19 0.31 HGI48_RS05310 TetR/AcrR family transcriptional regulator 0.24 HGI48_RS10270 D-hexose-6-phosphate mutarotase low > 71
Shewanella sp. ANA-3 0.30 Shewana3_1076 TetR family transcriptional regulator (RefSeq) 0.28 Shewana3_2553 aldose 1-epimerase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.30 SO3494 transcriptional regulator, TetR family (NCBI ptt file) 0.28 SO2769 conserved hypothetical protein (NCBI ptt file) — —
Enterobacter sp. TBS_079 0.29 MPMX20_01792 HTH-type transcriptional repressor ComR 0.22 MPMX20_01843 Putative glucose-6-phosphate 1-epimerase low > 85
Escherichia coli BW25113 0.28 b1111 ycfQ orf, hypothetical protein (VIMSS) 0.23 b1780 yeaD orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.28 ECD_01107 repressor for bhsA(ycfR) 0.22 ECD_01749 D-hexose-6-phosphate epimerase-like protein low > 61
Escherichia coli Nissle 1917 0.28 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR 0.22 ECOLIN_RS09925 D-hexose-6-phosphate mutarotase — —
Escherichia coli ECOR27 0.28 NOLOHH_21010 comR TetR family copper-responsive transcriptional repressor ComR 0.23 NOLOHH_17255 yeaD Putative glucose-6-phosphate 1-epimerase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_02555 HTH-type transcriptional repressor ComR 0.23 OHPLBJKB_01952 Putative glucose-6-phosphate 1-epimerase low > 73
Escherichia coli ECRC62 0.28 BNILDI_19175 comR TetR family copper-responsive transcriptional repressor ComR 0.23 BNILDI_16040 yeaD Putative glucose-6-phosphate 1-epimerase low > 75
Escherichia coli ECOR38 0.28 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR 0.22 HEPCGN_05115 yeaD Putative glucose-6-phosphate 1-epimerase low > 87
Escherichia coli ECRC102 0.28 NIAGMN_24345 comR TetR family copper-responsive transcriptional repressor ComR 0.22 NIAGMN_01340 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli ECRC98 0.28 JDDGAC_07145 comR TetR family copper-responsive transcriptional repressor ComR 0.22 JDDGAC_01300 yeaD Putative glucose-6-phosphate 1-epimerase low > 86
Escherichia coli ECRC99 0.28 KEDOAH_24270 comR TetR family copper-responsive transcriptional repressor ComR 0.22 KEDOAH_01385 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli ECRC100 0.28 OKFHMN_03485 comR TetR family copper-responsive transcriptional repressor ComR 0.22 OKFHMN_26725 yeaD Putative glucose-6-phosphate 1-epimerase low > 80
Escherichia coli ECRC101 0.28 MCAODC_22845 comR TetR family copper-responsive transcriptional repressor ComR 0.22 MCAODC_18685 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia fergusonii Becca 0.27 EFB2_02864 HTH-type transcriptional repressor ComR 0.22 EFB2_02214 Putative glucose-6-phosphate 1-epimerase low > 86
Pantoea sp. MT58 0.27 IAI47_09720 TetR/AcrR family transcriptional regulator 0.24 IAI47_08940 D-hexose-6-phosphate mutarotase low > 76
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1819 transcriptional regulator, TetR family 0.22 EX28DRAFT_1774 Uncharacterized enzymes related to aldose 1-epimerase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF3394 putative transcriptional repressor 0.21 GFF3477 Aldose 1-epimerase family protein YeaD low > 78
Rahnella sp. WP5 0.26 EX31_RS23895 TetR/AcrR family transcriptional regulator 0.28 EX31_RS06275 D-hexose-6-phosphate mutarotase low > 89
Klebsiella michiganensis M5al 0.26 BWI76_RS11190 putative TetR/AcrR family transcriptional regulatory protein 0.23 BWI76_RS11500 D-hexose-6-phosphate mutarotase low > 92
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_28110 TetR family transcriptional regulator 0.69 AO353_09920 aldose epimerase low > 101
Shewanella loihica PV-4 0.16 Shew_2729 TetR family transcriptional regulator (RefSeq) 0.29 Shew_2165 aldose 1-epimerase (RefSeq) — —
Dickeya dianthicola ME23 0.15 DZA65_RS22680 TetR/AcrR family transcriptional regulator 0.24 DZA65_RS10745 D-hexose-6-phosphate mutarotase low > 75

Not shown: 11 genomes with orthologs for PFLU_RS15475 only; 24 genomes with orthologs for PFLU_RS29785 only