Conservation of cofitness between PFLU_RS09095 and PFLU_RS06485 in Pseudomonas fluorescens SBW25

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS09095 AI-2E family transporter 1.0 PFLU_RS06485 ATP-dependent DNA ligase 0.49 19
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS09095 AI-2E family transporter 1.00 PFLU_RS06485 ATP-dependent DNA ligase low > 109
Pseudomonas simiae WCS417 0.99 PS417_09040 hypothetical protein 0.92 PS417_06420 ATP-dependent DNA ligase low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_5882 Putative membrane protein 0.81 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_19830 hypothetical protein 0.81 AO356_05490 ATP-dependent DNA ligase low > 104
Pseudomonas sp. RS175 0.84 PFR28_03068 Putative transport protein YdiK 0.83 PFR28_00508 DNA ligase low > 88
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3528 Putative membrane protein 0.83 Pf1N1B4_3180 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 87
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_2029 Protein of unknown function UPF0118 0.79 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_2029 Protein of unknown function UPF0118 0.79 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase low > 86
Pseudomonas putida KT2440 0.78 PP_4162 conserved membrane protein of unknown function 0.74 PP_1105 putative DNA ligase, ATP-dependent low > 96
Pseudomonas sp. S08-1 0.68 OH686_01920 Uncharacterized UPF0118 membrane protein 0.79 OH686_06060 DNA ligase, ATP-dependent, family low > 80
Pseudomonas stutzeri RCH2 0.67 Psest_2464 Predicted permease 0.74 Psest_1648 ATP-dependent DNA ligase low > 67
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS06810 membrane protein 0.59 BPHYT_RS26300 ATP-dependent DNA ligase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04605 Predicted PurR-regulated permease PerM 0.59 H281DRAFT_02819 DNA ligase-1 low > 103
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS23970 AI-2E family transporter 0.58 QEN71_RS20340 ATP-dependent DNA ligase low > 153
Sinorhizobium meliloti 1021 0.33 SMa0447 hypothetical protein 0.27 SMc03177 ATP-dependent DNA ligase low > 103
Rhizobium sp. OAE497 0.25 ABIE40_RS23785 AI-2E family transporter 0.28 ABIE40_RS04635 cisplatin damage response ATP-dependent DNA ligase low > 107
Azospirillum brasilense Sp245 0.19 AZOBR_RS27390 transporter 0.27 AZOBR_RS09960 ATP-dependent DNA ligase low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3026 putative membrane protein 0.50 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 90
Agrobacterium fabrum C58 0.17 Atu1739 permease 0.28 Atu0840 ATP-dependent DNA ligase low > 89

Not shown: 35 genomes with orthologs for PFLU_RS09095 only; 18 genomes with orthologs for PFLU_RS06485 only