Conservation of cofitness between PFLU_RS00365 and PFLU_RS05615 in Pseudomonas fluorescens SBW25

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 1.0 PFLU_RS05615 GlpM family protein 0.49 16
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 1.00 PFLU_RS05615 GlpM family protein low > 109
Pseudomonas simiae WCS417 0.99 PS417_00375 membrane protein 0.99 PS417_05530 membrane protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_10900 hypothetical protein 0.84 AO353_16260 hypothetical protein low > 101
Pseudomonas sp. RS175 0.83 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB 0.92 PFR28_03377 Inner membrane protein YdgC low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB 0.92 Pf1N1B4_777 Membrane protein glpM low > 87
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB 0.94 Pf6N2E2_5564 Membrane protein glpM low > 103
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_11495 hypothetical protein 0.93 AO356_18200 hypothetical protein low > 104
Pseudomonas putida KT2440 0.76 PP_0117 Zn(2+) ABC transporter - permease subunit 0.88 PP_1065 membrane protein required for efficient alginate biosynthesis low > 96
Enterobacter sp. TBS_079 0.56 MPMX20_02765 High-affinity zinc uptake system membrane protein ZnuB 0.64 MPMX20_02027 Inner membrane protein YdgC low > 85
Escherichia fergusonii Becca 0.55 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB 0.63 EFB2_02385 Inner membrane protein YdgC low > 86
Escherichia coli BL21 0.54 ECD_01830 zinc ABC transporter permease 0.62 ECD_01576 GlpM family inner membrane protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB 0.60 GFF1799 Putative inner membrane protein low > 78
Escherichia coli ECOR27 0.54 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB 0.62 NOLOHH_18175 ydgC Inner membrane protein YdgC — —
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components 0.62 EX28DRAFT_1548 Uncharacterized membrane protein required for alginate biosynthesis low > 76
Escherichia coli ECOR38 0.54 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB 0.63 HEPCGN_06045 ydgC Inner membrane protein YdgC low > 87
Escherichia coli ECRC62 0.54 BNILDI_15525 znuB zinc ABC transporter permease subunit ZnuB 0.62 BNILDI_16965 ydgC Inner membrane protein YdgC low > 75
Escherichia coli Nissle 1917 0.54 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB 0.63 ECOLIN_RS08975 GlpM family protein — —
Klebsiella michiganensis M5al 0.54 BWI76_RS18140 zinc ABC transporter permease 0.61 BWI76_RS16235 membrane protein low > 92
Escherichia coli ECRC98 0.54 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB 0.62 JDDGAC_02260 ydgC Inner membrane protein YdgC low > 86
Escherichia coli ECRC102 0.54 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB 0.62 NIAGMN_00405 ydgC Inner membrane protein YdgC — —
Escherichia coli BW25113 0.54 b1859 znuB high-affinity zinc transporter membrane component (NCBI) 0.62 b1607 ydgC conserved inner membrane protein associated with alginate biosynthesis (NCBI) low > 76
Escherichia coli ECRC99 0.54 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB 0.62 KEDOAH_00435 ydgC Inner membrane protein YdgC — —
Escherichia coli ECRC101 0.54 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB 0.62 MCAODC_17740 ydgC Inner membrane protein YdgC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01869 High-affinity zinc uptake system membrane protein ZnuB 0.62 OHPLBJKB_02119 Inner membrane protein YdgC low > 73
Escherichia coli ECRC100 0.54 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB 0.62 OKFHMN_27670 ydgC Inner membrane protein YdgC low > 80
Rahnella sp. WP5 0.51 EX31_RS10685 zinc ABC transporter permease subunit ZnuB 0.62 EX31_RS09700 GlpM family protein low > 89
Serratia liquefaciens MT49 0.51 IAI46_14615 zinc ABC transporter permease subunit ZnuB 0.60 IAI46_09195 GlpM family protein low > 86
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_10410 zinc ABC transporter permease 0.54 CSW01_17370 hypothetical protein low > 62
Dickeya dianthicola ME23 0.50 DZA65_RS10535 zinc ABC transporter permease subunit ZnuB 0.58 DZA65_RS09300 GlpM family protein 0.32 39
Dickeya dianthicola 67-19 0.50 HGI48_RS10120 zinc ABC transporter permease subunit ZnuB 0.59 HGI48_RS08995 GlpM family protein low > 71
Pectobacterium carotovorum WPP14 0.48 HER17_RS11815 zinc ABC transporter permease subunit ZnuB 0.59 HER17_RS21025 GlpM family protein low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB 0.61 DDA3937_RS08925 GlpM family protein low > 74

Not shown: 22 genomes with orthologs for PFLU_RS00365 only; 1 genomes with orthologs for PFLU_RS05615 only