Conservation of cofitness between OKFHMN_20250 and OKFHMN_14625 in Escherichia coli ECRC100

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_20250 relA GTP diphosphokinase 1.0 OKFHMN_14625 ilvC ketol-acid reductoisomerase 0.76 12
Escherichia coli ECRC99 1.00 KEDOAH_07880 relA GTP diphosphokinase 1.00 KEDOAH_13525 ilvC ketol-acid reductoisomerase — —
Escherichia coli ECOR27 1.00 NOLOHH_12125 relA GTP diphosphokinase 1.00 NOLOHH_06760 ilvC ketol-acid reductoisomerase low > 75
Escherichia coli BW25113 1.00 b2784 relA (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) 0.99 b3774 ilvC ketol-acid reductoisomerase (NCBI) 0.54 18
Escherichia coli ECRC102 1.00 NIAGMN_18020 relA GTP diphosphokinase 1.00 NIAGMN_12380 ilvC ketol-acid reductoisomerase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15515 GTP diphosphokinase 1.00 ECOLIN_RS21680 ketol-acid reductoisomerase low > 55
Escherichia coli ECRC98 1.00 JDDGAC_23915 relA GTP diphosphokinase 1.00 JDDGAC_18245 ilvC ketol-acid reductoisomerase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_19500 relA GTP diphosphokinase 1.00 HEPCGN_13335 ilvC ketol-acid reductoisomerase 0.87 19
Escherichia coli BL21 1.00 ECD_02629 (p)ppGpp synthetase I/GTP pyrophosphokinase 0.99 ECD_03652 ketol-acid reductoisomerase, NAD(P)-binding low > 61
Escherichia coli ECRC101 1.00 MCAODC_10775 relA GTP diphosphokinase 1.00 MCAODC_05130 ilvC ketol-acid reductoisomerase 0.54 73
Escherichia coli ECRC62 1.00 BNILDI_10630 relA GTP diphosphokinase 1.00 BNILDI_04765 ilvC ketol-acid reductoisomerase 0.60 8
Escherichia fergusonii Becca 1.00 EFB2_01133 GTP pyrophosphokinase 1.00 EFB2_04862 Ketol-acid reductoisomerase (NADP(+)) low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00947 GTP pyrophosphokinase 0.99 OHPLBJKB_04279 Ketol-acid reductoisomerase (NADP(+)) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4837 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 0.99 GFF2896 Ketol-acid reductoisomerase (EC 1.1.1.86) low > 78
Klebsiella michiganensis M5al 0.94 BWI76_RS22805 GTP diphosphokinase 0.96 BWI76_RS00990 ketol-acid reductoisomerase 0.60 11
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2864 (p)ppGpp synthetase, RelA/SpoT family 0.95 EX28DRAFT_4446 ketol-acid reductoisomerase (EC 1.1.1.86) low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03653 GTP pyrophosphokinase 0.95 MPMX20_04496 Ketol-acid reductoisomerase (NADP(+)) 0.44 70
Dickeya dadantii 3937 0.87 DDA3937_RS17015 GTP diphosphokinase 0.89 DDA3937_RS20130 ketol-acid reductoisomerase low > 74
Dickeya dianthicola 67-19 0.87 HGI48_RS17070 GTP diphosphokinase 0.89 HGI48_RS20270 ketol-acid reductoisomerase low > 71
Dickeya dianthicola ME23 0.87 DZA65_RS18145 GTP diphosphokinase 0.90 DZA65_RS21310 ketol-acid reductoisomerase low > 75
Pectobacterium carotovorum WPP14 0.86 HER17_RS04115 GTP diphosphokinase 0.89 HER17_RS01100 ketol-acid reductoisomerase 0.58 44
Erwinia tracheiphila SCR3 0.86 LU632_RS06350 relA GTP diphosphokinase 0.90 LU632_RS24385 ilvC ketol-acid reductoisomerase low > 74
Serratia liquefaciens MT49 0.85 IAI46_03600 GTP diphosphokinase 0.89 IAI46_24325 ketol-acid reductoisomerase 0.67 35
Rahnella sp. WP5 0.85 EX31_RS07955 GTP diphosphokinase 0.90 EX31_RS15020 ketol-acid reductoisomerase 0.86 43
Pantoea sp. MT58 0.84 IAI47_04120 GTP diphosphokinase 0.90 IAI47_01050 ketol-acid reductoisomerase 0.40 69
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_12405 GTP diphosphokinase 0.76 CSW01_00840 ketol-acid reductoisomerase low > 62
Shewanella sp. ANA-3 0.59 Shewana3_1111 (p)ppGpp synthetase I, SpoT/RelA (RefSeq) 0.74 Shewana3_0355 ketol-acid reductoisomerase (RefSeq) 0.87 14
Shewanella amazonensis SB2B 0.58 Sama_1033 GTP diphosphokinase (RefSeq) 0.75 Sama_3282 ketol-acid reductoisomerase (RefSeq) 0.94 2
Shewanella oneidensis MR-1 0.58 SO3455 relA GTP pyrophosphokinase (NCBI ptt file) 0.74 SO4349 ilvC ketol-acid reductoisomerase (NCBI ptt file) 0.94 10
Shewanella loihica PV-4 0.58 Shew_1202 (p)ppGpp synthetase I, SpoT/RelA (RefSeq) 0.73 Shew_0288 ketol-acid reductoisomerase (RefSeq) 0.89 21
Alteromonas macleodii MIT1002 0.53 MIT1002_00794 GTP pyrophosphokinase 0.73 MIT1002_04045 Ketol-acid reductoisomerase low > 70

Not shown: 41 genomes with orthologs for OKFHMN_20250 only; 1 genomes with orthologs for OKFHMN_14625 only