| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.0 | OHPLBJKB_01568 | | Cytidine deaminase | 1.0 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.41 | 11 |
| Escherichia coli BL21 | 1.00 | ECD_02072 | | cytidine/deoxycytidine deaminase | 1.00 | ECD_00109 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase | low | > 61 |
| Escherichia coli BW25113 | 1.00 | b2143 | cdd | cytidine deaminase (NCBI) | 1.00 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_15140 | cdd | cytidine deaminase | 1.00 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_22835 | cdd | cytidine deaminase | 0.98 | HEPCGN_08505 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia fergusonii Becca | 1.00 | EFB2_01713 | | Cytidine deaminase | 0.98 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS12545 | | cytidine deaminase | 0.98 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_14060 | cdd | cytidine deaminase | 1.00 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_04615 | cdd | cytidine deaminase | 0.99 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_21335 | cdd | cytidine deaminase | 0.99 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_23570 | cdd | cytidine deaminase | 0.99 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.59 | 39 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_14620 | cdd | cytidine deaminase | 0.99 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_27525 | cdd | cytidine deaminase | 0.99 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.84 | GFF3795 | | Cytidine deaminase (EC 3.5.4.5) | 0.89 | GFF129 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 78 |
| Enterobacter asburiae PDN3 | 0.82 | EX28DRAFT_0412 | | cytidine deaminase (EC 3.5.4.5) | 0.86 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | — | — |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_03115 | | Cytidine deaminase | 0.85 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 85 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS19610 | | Cytidine deaminase (EC 3.5.4.5) (from data) | 0.84 | BWI76_RS04850 | | N-acetylmuramoyl-L-alanine amidase | low | > 92 |
| Rahnella sp. WP5 | 0.61 | EX31_RS18660 | | cytidine deaminase | 0.71 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 89 |
| Serratia liquefaciens MT49 | 0.60 | IAI46_07940 | | cytidine deaminase | 0.71 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Pantoea sp. MT58 | 0.56 | IAI47_06760 | | cytidine deaminase | 0.69 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS13485 | | cytidine deaminase | 0.71 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Dickeya dadantii 3937 | 0.48 | DDA3937_RS08485 | | cytidine deaminase | 0.67 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 74 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS08940 | | cytidine deaminase | 0.68 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS08650 | | cytidine deaminase | 0.68 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 71 |
| Vibrio cholerae E7946 ATCC 55056 | 0.44 | CSW01_06225 | | cytidine deaminase | 0.60 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 62 |
| Shewanella loihica PV-4 | 0.38 | Shew_1610 | | cytidine deaminase (RefSeq) | 0.58 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.25 | 56 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_2573 | | Cytidine deaminase (EC 3.5.4.5) (from data) | 0.57 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.36 | SO2791 | cdd | Cytidine deaminase (EC 3.5.4.5) (from data) | 0.57 | SO0421 | ampD | AmpD protein (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.36 | Sama_1974 | | Cytidine deaminase (EC 3.5.4.5) (from data) | 0.56 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 62 |
Not shown: 1 genomes with orthologs for OHPLBJKB_01568 only; 33 genomes with orthologs for OHPLBJKB_03551 only