Conservation of cofitness between OHPLBJKB_01568 and OHPLBJKB_00470 in Escherichia coli HS(pFamp)R (ATCC 700891)

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli HS(pFamp)R (ATCC 700891) 1.0 OHPLBJKB_01568 Cytidine deaminase 1.0 OHPLBJKB_00470 Periplasmic pH-dependent serine endoprotease DegQ 0.48 3
Escherichia coli BW25113 1.00 b2143 cdd cytidine deaminase (NCBI) 1.00 b3234 degQ serine endoprotease, periplasmic (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_15140 cdd cytidine deaminase 1.00 NOLOHH_09605 degQ serine endoprotease DegQ low > 75
Escherichia coli BL21 1.00 ECD_02072 cytidine/deoxycytidine deaminase 1.00 ECD_03094 serine endoprotease, periplasmic low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12545 cytidine deaminase 1.00 ECOLIN_RS18545 serine endoprotease DegQ — —
Escherichia fergusonii Becca 1.00 EFB2_01713 Cytidine deaminase 1.00 EFB2_00596 Periplasmic pH-dependent serine endoprotease DegQ low > 86
Escherichia coli ECOR38 1.00 HEPCGN_22835 cdd cytidine deaminase 1.00 HEPCGN_16675 degQ serine endoprotease DegQ low > 87
Escherichia coli ECRC62 1.00 BNILDI_14060 cdd cytidine deaminase 1.00 BNILDI_01930 degQ serine endoprotease DegQ low > 75
Escherichia coli ECRC101 0.99 MCAODC_14620 cdd cytidine deaminase 1.00 MCAODC_08325 degQ serine endoprotease DegQ low > 87
Escherichia coli ECRC102 0.99 NIAGMN_21335 cdd cytidine deaminase 1.00 NIAGMN_15565 degQ serine endoprotease DegQ — —
Escherichia coli ECRC100 0.99 OKFHMN_23570 cdd cytidine deaminase 1.00 OKFHMN_17805 degQ serine endoprotease DegQ low > 80
Escherichia coli ECRC99 0.99 KEDOAH_04615 cdd cytidine deaminase 1.00 KEDOAH_10345 degQ serine endoprotease DegQ — —
Escherichia coli ECRC98 0.99 JDDGAC_27525 cdd cytidine deaminase 1.00 JDDGAC_21430 degQ serine endoprotease DegQ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF3795 Cytidine deaminase (EC 3.5.4.5) 0.91 GFF2974 Outer membrane stress sensor protease DegQ, serine protease low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0412 cytidine deaminase (EC 3.5.4.5) 0.87 EX28DRAFT_3283 periplasmic serine protease, Do/DeqQ family low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_03115 Cytidine deaminase 0.86 MPMX20_04138 Periplasmic pH-dependent serine endoprotease DegQ low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS19610 Cytidine deaminase (EC 3.5.4.5) (from data) 0.83 BWI76_RS25365 serine endoprotease DegQ low > 92
Rahnella sp. WP5 0.61 EX31_RS18660 cytidine deaminase 0.66 EX31_RS12475 Do family serine endopeptidase low > 89
Serratia liquefaciens MT49 0.60 IAI46_07940 cytidine deaminase 0.72 IAI46_22390 serine endoprotease DegQ low > 86
Erwinia tracheiphila SCR3 0.60 LU632_RS08555 cdd cytidine deaminase 0.65 LU632_RS21355 Do family serine endopeptidase low > 74
Pantoea sp. MT58 0.56 IAI47_06760 cytidine deaminase 0.74 IAI47_17260 serine endoprotease DegQ low > 76
Pectobacterium carotovorum WPP14 0.49 HER17_RS13485 cytidine deaminase 0.71 HER17_RS19985 serine endoprotease DegQ low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS08485 cytidine deaminase 0.70 DDA3937_RS01605 serine endoprotease DegQ low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS08940 cytidine deaminase 0.70 DZA65_RS01585 serine endoprotease DegQ low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS08650 cytidine deaminase 0.70 HGI48_RS01520 serine endoprotease DegQ low > 71
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_06225 cytidine deaminase 0.57 CSW01_03020 serine endoprotease DegQ low > 62
Shewanella loihica PV-4 0.38 Shew_1610 cytidine deaminase (RefSeq) 0.53 Shew_3296 protease Do (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_2573 Cytidine deaminase (EC 3.5.4.5) (from data) 0.54 Shewana3_0690 peptidase Do (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO2791 cdd Cytidine deaminase (EC 3.5.4.5) (from data) 0.53 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.36 Sama_1974 Cytidine deaminase (EC 3.5.4.5) (from data) 0.54 Sama_3073 serine protease (RefSeq) low > 62

Not shown: 0 genomes with orthologs for OHPLBJKB_01568 only; 17 genomes with orthologs for OHPLBJKB_00470 only