Conservation of cofitness between OHPLBJKB_01568 and OHPLBJKB_00093 in Escherichia coli HS(pFamp)R (ATCC 700891)

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli HS(pFamp)R (ATCC 700891) 1.0 OHPLBJKB_01568 Cytidine deaminase 1.0 OHPLBJKB_00093 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 0.54 2
Escherichia coli ECOR27 1.00 NOLOHH_15140 cdd cytidine deaminase 0.99 NOLOHH_07645 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL low > 75
Escherichia coli BL21 1.00 ECD_02072 cytidine/deoxycytidine deaminase 1.00 ECD_03464 tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent low > 61
Escherichia coli BW25113 1.00 b2143 cdd cytidine deaminase (NCBI) 0.99 b3606 yibK predicted rRNA methylase (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12545 cytidine deaminase 0.99 ECOLIN_RS20585 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL — —
Escherichia fergusonii Becca 1.00 EFB2_01713 Cytidine deaminase 0.99 EFB2_00204 tRNA (cytidine(34)-2'-O)-methyltransferase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_22835 cdd cytidine deaminase 0.99 HEPCGN_14605 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL low > 87
Escherichia coli ECRC62 1.00 BNILDI_14060 cdd cytidine deaminase 0.99 BNILDI_03870 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL low > 75
Escherichia coli ECRC101 0.99 MCAODC_14620 cdd cytidine deaminase 0.99 MCAODC_06275 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL low > 87
Escherichia coli ECRC99 0.99 KEDOAH_04615 cdd cytidine deaminase 0.99 KEDOAH_12385 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL — —
Escherichia coli ECRC102 0.99 NIAGMN_21335 cdd cytidine deaminase 0.99 NIAGMN_13525 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL — —
Escherichia coli ECRC100 0.99 OKFHMN_23570 cdd cytidine deaminase 0.99 OKFHMN_15765 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL low > 80
Escherichia coli ECRC98 0.99 JDDGAC_27525 cdd cytidine deaminase 0.99 JDDGAC_19390 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF3795 Cytidine deaminase (EC 3.5.4.5) 0.94 GFF408 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0412 cytidine deaminase (EC 3.5.4.5) 0.94 EX28DRAFT_3857 tRNA (cytidine(34)-2'-O)-methyltransferase low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_03115 Cytidine deaminase 0.94 MPMX20_00127 tRNA (cytidine(34)-2'-O)-methyltransferase low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS19610 Cytidine deaminase (EC 3.5.4.5) (from data) 0.90 BWI76_RS27200 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 92
Rahnella sp. WP5 0.61 EX31_RS18660 cytidine deaminase 0.85 EX31_RS14330 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 89
Serratia liquefaciens MT49 0.60 IAI46_07940 cytidine deaminase 0.86 IAI46_24670 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 86
Erwinia tracheiphila SCR3 0.60 LU632_RS08555 cdd cytidine deaminase 0.82 LU632_RS21865 trmL tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 74
Pantoea sp. MT58 0.56 IAI47_06760 cytidine deaminase 0.84 IAI47_00750 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 76
Pectobacterium carotovorum WPP14 0.49 HER17_RS13485 cytidine deaminase 0.55 HER17_RS00645 tRNA (cytidine(34)-2'-O)-methyltransferase low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS08485 cytidine deaminase 0.56 DDA3937_RS00755 tRNA (cytidine(34)-2'-O)-methyltransferase low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS08940 cytidine deaminase 0.57 DZA65_RS21630 tRNA (cytidine(34)-2'-O)-methyltransferase low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS08650 cytidine deaminase 0.57 HGI48_RS20615 tRNA (cytidine(34)-2'-O)-methyltransferase low > 71
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_06225 cytidine deaminase 0.64 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 62
Shewanella loihica PV-4 0.38 Shew_1610 cytidine deaminase (RefSeq) 0.58 Shew_3577 RNA methyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_2573 Cytidine deaminase (EC 3.5.4.5) (from data) 0.64 Shewana3_3934 RNA methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO2791 cdd Cytidine deaminase (EC 3.5.4.5) (from data) 0.65 SO4529 RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.36 Sama_1974 Cytidine deaminase (EC 3.5.4.5) (from data) 0.64 Sama_3440 RNA methyltransferase TrmH, group 2 (RefSeq) low > 62

Not shown: 0 genomes with orthologs for OHPLBJKB_01568 only; 57 genomes with orthologs for OHPLBJKB_00093 only