Conservation of cofitness between NOLOHH_13120 and NOLOHH_12390 in Escherichia coli ECOR27

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 NOLOHH_12390 hypE hydrogenase maturation carbamoyl dehydratase HypE 0.65 12
Escherichia coli BW25113 1.00 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 0.99 b2730 hypE carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein (RefSeq) low > 76
Escherichia coli BL21 1.00 ECD_02456 putative 4Fe-4S cluster-containing protein 0.99 ECD_02580 carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein low > 61
Escherichia coli ECRC62 1.00 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 BNILDI_10940 hypE hydrogenase maturation carbamoyl dehydratase HypE low > 75
Escherichia coli ECRC100 0.99 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 OKFHMN_20545 hypE hydrogenase maturation carbamoyl dehydratase HypE low > 80
Escherichia coli ECOR38 0.99 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 HEPCGN_19735 hypE hydrogenase maturation carbamoyl dehydratase HypE low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01145 Ferredoxin YfhL 0.99 OHPLBJKB_01004 Carbamoyl dehydratase HypE low > 73
Escherichia coli ECRC101 0.99 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 MCAODC_11070 hypE hydrogenase maturation carbamoyl dehydratase HypE low > 87
Escherichia coli ECRC98 0.99 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 JDDGAC_24210 hypE hydrogenase maturation carbamoyl dehydratase HypE low > 86
Escherichia coli ECRC99 0.99 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 KEDOAH_07590 hypE hydrogenase maturation carbamoyl dehydratase HypE — —
Escherichia coli ECRC102 0.99 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NIAGMN_18315 hypE hydrogenase maturation carbamoyl dehydratase HypE — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 0.99 ECOLIN_RS15255 hydrogenase maturation carbamoyl dehydratase HypE — —
Escherichia fergusonii Becca 0.98 EFB2_01334 Ferredoxin YfhL 0.99 EFB2_01193 Carbamoyl dehydratase HypE low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.90 GFF4724 [NiFe] hydrogenase metallocenter assembly protein HypE low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0084 4Fe-4S dicluster domain 0.85 EX28DRAFT_2821 hydrogenase expression/formation protein HypE low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_03433 Ferredoxin YfhL 0.87 MPMX20_03615 Carbamoyl dehydratase HypE low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.85 BWI76_RS22365 hydrogenase expression/formation protein HypE — —
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.73 IAI46_12565 hydrogenase expression/formation protein HypE low > 86
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.73 HGI48_RS14180 hydrogenase expression/formation protein HypE low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.73 DDA3937_RS14205 hydrogenase expression/formation protein HypE low > 74
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.74 DZA65_RS14855 hydrogenase expression/formation protein HypE low > 75
Rahnella sp. WP5 0.79 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.70 EX31_RS19875 hydrogenase expression/formation protein HypE low > 89
Dechlorosoma suillum PS 0.60 Dsui_1029 hypothetical protein 0.41 Dsui_1158 hydrogenase expression/formation protein HypE — —
Shewanella amazonensis SB2B 0.59 Sama_1002 ferredoxin, 4Fe-4S (RefSeq) 0.42 Sama_1670 hydrogenase expression/formation protein HypE (RefSeq) low > 62
Shewanella oneidensis MR-1 0.58 SO1251 ferredoxin, 4Fe-4S (NCBI ptt file) 0.41 SO2090 hypE hydrogenase expression/formation protein HypE (NCBI ptt file) — —
Shewanella loihica PV-4 0.58 Shew_2785 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.43 Shew_1756 hydrogenase expression/formation protein HypE (RefSeq) low > 60
Shewanella sp. ANA-3 0.58 Shewana3_1067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.42 Shewana3_1868 hydrogenase expression/formation protein HypE (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin 0.36 QEN71_RS42585 hydrogenase expression/formation protein HypE 0.27 133
Alteromonas macleodii MIT1002 0.57 MIT1002_02343 putative ferredoxin-like protein 0.38 MIT1002_00282 Hydrogenase isoenzymes formation protein HypE low > 70
Rhodopseudomonas palustris CGA009 0.46 TX73_003430 YfhL family 4Fe-4S dicluster ferredoxin 0.43 TX73_005035 hydrogenase expression/formation protein HypE low > 86

Not shown: 42 genomes with orthologs for NOLOHH_13120 only; 11 genomes with orthologs for NOLOHH_12390 only