Conservation of cofitness between NOLOHH_06505 and NOLOHH_09345 in Escherichia coli ECOR27

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06505 rarD EamA family transporter RarD 1.0 NOLOHH_09345 yrdD Uncharacterized protein YrdD 0.65 10
Escherichia coli ECRC62 1.00 BNILDI_05025 rarD EamA family transporter RarD 0.99 BNILDI_02175 yrdD Uncharacterized protein YrdD low > 75
Escherichia coli ECRC98 1.00 JDDGAC_18000 rarD EamA family transporter RarD 0.99 JDDGAC_21175 yrdD Uncharacterized protein YrdD low > 86
Escherichia coli ECRC102 1.00 NIAGMN_12130 rarD EamA family transporter RarD 0.99 NIAGMN_15315 yrdD Uncharacterized protein YrdD — —
Escherichia coli ECRC99 1.00 KEDOAH_13775 rarD EamA family transporter RarD 0.99 KEDOAH_10595 yrdD Uncharacterized protein YrdD — —
Escherichia coli ECRC100 1.00 OKFHMN_14375 rarD EamA family transporter RarD 0.99 OKFHMN_17555 yrdD Uncharacterized protein YrdD low > 80
Escherichia coli ECRC101 0.99 MCAODC_04880 rarD EamA family transporter RarD 0.99 MCAODC_08075 yrdD Uncharacterized protein YrdD low > 87
Escherichia coli ECOR38 0.99 HEPCGN_13075 rarD EamA family transporter RarD 0.99 HEPCGN_16375 yrdD Uncharacterized protein YrdD low > 87
Escherichia coli BW25113 0.99 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.99 b3283 yrdD predicted DNA topoisomerase (NCBI) low > 76
Escherichia coli BL21 0.99 ECD_03698 putative chloramphenical resistance permease 0.99 ECD_03134 ssDNA-binding protein, function unknown low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04232 Protein RarD 0.99 OHPLBJKB_00420 DNA topoisomerase 1 low > 73
Escherichia fergusonii Becca 0.99 EFB2_04818 Protein RarD 0.99 EFB2_00540 DNA topoisomerase 1 0.63 44
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21920 EamA family transporter RarD 0.99 ECOLIN_RS18850 type I DNA topoisomerase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF245 Protein rarD 0.87 GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4484 rarD protein 0.86 EX28DRAFT_0044 Zn-finger domain associated with topoisomerase type I low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04461 Protein RarD 0.85 MPMX20_04191 DNA topoisomerase 1 low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01230 chloramphenicol resistance permease RarD 0.88 BWI76_RS25655 DNA topoisomerase type IA zn finger domain-containing protein low > 92
Serratia liquefaciens MT49 0.80 IAI46_00755 EamA family transporter RarD 0.76 IAI46_23250 topoisomerase DNA-binding C4 zinc finger domain-containing protein low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS01380 EamA family transporter RarD 0.77 HER17_RS02240 topoisomerase DNA-binding C4 zinc finger domain-containing protein low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS24110 rarD EamA family transporter RarD 0.74 LU632_RS22455 topoisomerase DNA-binding C4 zinc finger domain-containing protein low > 74
Pantoea sp. MT58 0.73 IAI47_18375 EamA family transporter RarD 0.78 IAI47_02305 topoisomerase DNA-binding C4 zinc finger domain-containing protein low > 76
Rahnella sp. WP5 0.71 EX31_RS15195 EamA family transporter RarD 0.77 EX31_RS15960 hypothetical protein low > 89
Dickeya dadantii 3937 0.67 DDA3937_RS19865 EamA family transporter RarD 0.75 DDA3937_RS22495 topoisomerase DNA-binding C4 zinc finger domain-containing protein low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS21060 EamA family transporter RarD 0.75 DZA65_RS20325 hypothetical protein low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20020 EamA family transporter RarD 0.74 HGI48_RS19200 topoisomerase DNA-binding C4 zinc finger domain-containing protein low > 71
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01040 protein RarD 0.54 CSW01_00255 DNA topoisomerase low > 62
Shewanella oneidensis MR-1 0.59 SO4243 rarD rarD protein (NCBI ptt file) 0.43 SO0036 topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.44 Shewana3_0039 DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.57 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.44 Shew_3731 DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_0332 rarD protein (RefSeq) 0.44 Sama_0048 topoisomerase DNA-binding C4 zinc finger domain-containing protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00151 putative chloramphenical resistance permease RarD 0.43 MIT1002_00024 DNA topoisomerase 1 low > 70

Not shown: 49 genomes with orthologs for NOLOHH_06505 only; 0 genomes with orthologs for NOLOHH_09345 only